Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AC136428.4-201ENST00000634254 1155 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AOX3P-204ENST00000491025 2107 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SNED1Q8TER0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SNED1Q8TER0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SNED1Q8TER0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SNED1Q8TER0 AC119674.1-213ENST00000641177 1386 ntBASIC7.15□□□□□ -1.26
SNED1Q8TER0 CASC19-248ENST00000641674 1356 ntBASIC7.15□□□□□ -1.26
SNED1Q8TER0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
SNED1Q8TER0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.15□□□□□ -1.26
SNED1Q8TER0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.15□□□□□ -1.26
SNED1Q8TER0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SNED1Q8TER0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SNED1Q8TER0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SNED1Q8TER0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNED1Q8TER0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNED1Q8TER0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AL355032.1-201ENST00000472981 438 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 BX284632.1-201ENST00000478218 541 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AC073610.1-201ENST00000489971 396 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AC096754.1-201ENST00000508904 818 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 HSPE1P2-201ENST00000554777 306 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 SETP3-201ENST00000581726 813 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AC091193.1-201ENST00000604640 448 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 MIR6748-201ENST00000610433 71 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 AC005840.5-201ENST00000619166 599 ntBASIC7.15□□□□□ -1.27
SNED1Q8TER0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SNED1Q8TER0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
SNED1Q8TER0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SNED1Q8TER0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC114786.1-201ENST00000512892 1415 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AL353626.3-201ENST00000413399 657 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AL450023.1-201ENST00000450868 751 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 CBX1P5-201ENST00000475330 559 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC021146.10-201ENST00000515628 706 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 OR8G3P-201ENST00000533406 921 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 HAUS8P1-201ENST00000549005 542 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 AL139407.1-201ENST00000613826 1175 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC008115.3-201ENST00000614874 549 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 AC021766.1-201ENST00000624404 741 ntBASIC7.14□□□□□ -1.27
SNED1Q8TER0 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNED1Q8TER0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SNED1Q8TER0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 RN7SKP125-201ENST00000410481 302 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 RPL23AP27-201ENST00000415161 451 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 NENFP1-201ENST00000419476 466 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms