Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 PPIAP10-201ENST00000438675 458 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 MED28P3-201ENST00000444288 531 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 RBMY2HP-201ENST00000457961 720 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 RPS3AP49-201ENST00000472161 790 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC105420.1-201ENST00000504389 582 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 GLUD1P3-202ENST00000508551 200 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC107958.1-201ENST00000556576 290 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC007346.2-201ENST00000564816 892 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 RPL29P33-201ENST00000587474 316 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC005618.4-201ENST00000625053 554 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AL137141.1-201ENST00000624622 4836 ntBASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC112Q8NEF3 AC024587.1-201ENST00000505925 2157 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC011416.1-201ENST00000514947 1732 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RN7SKP69-201ENST00000365390 305 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RNA5SP187-201ENST00000384400 119 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RPS7P14-201ENST00000426405 583 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC002069.1-201ENST00000429649 1159 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RPL29P23-201ENST00000486188 442 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC093816.1-201ENST00000515076 913 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RN7SKP288-201ENST00000516227 268 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC090826.1-203ENST00000569235 490 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC119403.2-201ENST00000590960 598 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 NDUFB9P1-201ENST00000604683 510 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC008555.7-201ENST00000605008 583 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AL591167.1-201ENST00000607321 456 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AL359091.2-201ENST00000609303 556 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC022400.9-201ENST00000623633 273 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 SNX18P12-201ENST00000624821 759 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 AC130304.1-201ENST00000622942 2385 ntBASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC112Q8NEF3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC112Q8NEF3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC112Q8NEF3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 RPL11P3-201ENST00000395256 523 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 VN1R12P-201ENST00000403778 876 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AL359885.1-201ENST00000415786 903 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 KATNBL1P2-201ENST00000433311 835 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 RPL5P25-201ENST00000441148 775 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 FRG2FP-204ENST00000453982 852 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 ACA64.4-201ENST00000459070 127 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 OR4A43P-201ENST00000532938 908 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AC126615.2-201ENST00000553003 515 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AC090286.3-201ENST00000573133 187 ntBASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC112Q8NEF3 AL034546.1-201ENST00000623740 3693 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms