Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CCDC11P1-201ENST00000503137 1162 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 ST13P12-201ENST00000508958 1094 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC090958.1-201ENST00000511122 351 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC005632.2-201ENST00000564271 828 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AP001823.1-201ENST00000604056 1003 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 OR51C1P-201ENST00000608504 942 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 uc_338.26-201ENST00000612659 160 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 AC138907.8-201ENST00000623981 2256 ntBASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC50Q8IVM0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC018717.1-201ENST00000457712 1505 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 RNA5SP187-201ENST00000384400 119 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 SEPT7P2-202ENST00000398921 823 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 CUBNP2-201ENST00000443534 1139 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AL512593.1-201ENST00000444758 779 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 ACA64.4-201ENST00000459070 127 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC095052.1-201ENST00000509955 863 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC138517.1-201ENST00000515724 568 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 RN7SKP288-201ENST00000516227 268 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC138832.1-201ENST00000522871 556 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC021269.1-201ENST00000526860 705 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC090286.3-201ENST00000573133 187 ntBASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC50Q8IVM0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC026523.2-201ENST00000625039 7739 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC027279.4-201ENST00000624371 2072 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 PSMA6P1-201ENST00000400275 741 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 RN7SKP166-201ENST00000410812 305 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 RPS15AP30-201ENST00000420976 390 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 REREP1Y-201ENST00000422655 198 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 REREP2Y-201ENST00000439103 200 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 RPL12P49-201ENST00000441100 121 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 TRBV5-2-201ENST00000489095 273 ntBASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC50Q8IVM0 OR8Q1P-201ENST00000526467 655 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms