Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 AC130304.1-201ENST00000622942 2385 ntBASIC6.21□□□□□ -1.42
BHLHA9Q7RTU4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL121835.1-201ENST00000404250 354 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC016739.1-201ENST00000405359 345 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 SLC20A1P1-201ENST00000413906 956 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 CUBNP2-201ENST00000443534 1139 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC092685.1-201ENST00000447960 1243 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC093166.4-201ENST00000457867 318 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL445687.2-201ENST00000458156 728 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL122020.1-201ENST00000472287 459 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL355032.1-201ENST00000472981 438 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 RNA5SP271-201ENST00000516700 88 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 PCNAP4-201ENST00000532690 730 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC103968.1-201ENST00000557841 573 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 TXNP4-201ENST00000575018 310 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC096947.1-201ENST00000603233 470 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC015982.1-201ENST00000608113 465 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC016252.1-201ENST00000609721 474 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AP005431.1-201ENST00000618479 319 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 OR11H2-202ENST00000641517 1085 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC087269.2-201ENST00000641764 975 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 BRAFP1-201ENST00000445336 2703 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 AL355377.1-201ENST00000621125 1653 ntBASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BHLHA9Q7RTU4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 HMGN1P20-201ENST00000411849 300 ntBASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 USP9YP14-201ENST00000430663 563 ntBASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AL512637.1-201ENST00000439523 1231 ntBASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 UBFD1P1-201ENST00000473259 814 ntBASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 OR8K4P-201ENST00000534608 872 ntBASIC6.19□□□□□ -1.42
BHLHA9Q7RTU4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms