Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 KATNBL1P4-201ENST00000503545 918 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 OR5D2P-201ENST00000524390 911 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC007956.1-201ENST00000555623 542 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC015982.1-201ENST00000608113 465 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC018690.1-201ENST00000608144 626 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AC108673.3-201ENST00000609183 335 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AL357562.1-201ENST00000624911 609 ntBASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RFWD3Q6PCD5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 CCNT2P1-201ENST00000423082 1315 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 SAMMSON-210ENST00000641260 1308 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TMSB4XP2-201ENST00000335179 210 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RNA5SP477-201ENST00000362639 119 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RNU105B-201ENST00000364478 208 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RPL6P21-201ENST00000418672 846 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC079807.1-201ENST00000429993 481 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AP003396.4-201ENST00000527574 265 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 OR6M2P-201ENST00000529831 871 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC068305.2-201ENST00000550567 1205 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RPA2P1-201ENST00000556557 721 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC108865.2-201ENST00000606881 432 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC096861.1-201ENST00000616652 240 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 AC245014.3-201ENST00000618589 347 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 FO681491.1-202ENST00000623392 737 ntBASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RFWD3Q6PCD5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 SNRPEP6-201ENST00000407465 277 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AL354890.1-201ENST00000413730 346 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC007562.1-201ENST00000421819 517 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC023274.2-201ENST00000445264 521 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC005077.1-201ENST00000449226 375 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC016027.4-201ENST00000450866 277 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC094085.1-201ENST00000468914 584 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC114728.1-201ENST00000488289 483 ntBASIC6.25□□□□□ -1.41
RFWD3Q6PCD5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms