Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.92□□□□□ -0.98
VARS2Q5ST30 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
VARS2Q5ST30 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VARS2Q5ST30 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC8.92□□□□□ -0.98
VARS2Q5ST30 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.92□□□□□ -0.98
VARS2Q5ST30 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VARS2Q5ST30 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
VARS2Q5ST30 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 FMO10P-201ENST00000455032 1493 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 RNA5SP141-201ENST00000364543 120 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 RNA5SP427-201ENST00000365323 119 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 SNORA57.2-201ENST00000391265 128 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 BX890604.2-201ENST00000427883 474 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 RPL21P88-201ENST00000436649 436 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC104332.1-201ENST00000440471 797 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC092569.1-201ENST00000455192 258 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 RN7SL587P-201ENST00000459853 281 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AL031864.2-201ENST00000498507 350 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ENPP7P3-201ENST00000509123 241 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 GUSBP3-201ENST00000509348 423 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 NPM1P52-201ENST00000518264 846 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC022878.1-201ENST00000530684 149 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC015818.5-201ENST00000578659 356 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC073534.1-201ENST00000598671 1056 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC112191.3-201ENST00000604371 277 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 PRR13P7-201ENST00000605538 430 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC113361.1-201ENST00000606683 543 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC016876.3-201ENST00000610459 426 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 DISC2.1-201ENST00000612827 205 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 RN7SL113P-201ENST00000619959 299 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 AC244517.12-201ENST00000623581 663 ntBASIC8.91□□□□□ -0.98
VARS2Q5ST30 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.91□□□□□ -0.98
VARS2Q5ST30 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
VARS2Q5ST30 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL592429.1-201ENST00000403909 1473 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 RNU6-433P-201ENST00000363216 104 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 Y_RNA.112-201ENST00000363250 102 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms