Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RPL21P133-201ENST00000443666 476 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 OR13K1P-201ENST00000444577 975 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 CBX1P5-201ENST00000475330 559 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC023818.1-201ENST00000498379 384 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.2□□□□□ -1.1
PTCH1Q13635 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.2□□□□□ -1.1
PTCH1Q13635 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PTCH1Q13635 GARSP1-201ENST00000570895 719 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 MIR4301-201ENST00000577203 66 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 SUGT1P3-202ENST00000604259 383 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 AC024589.2-201ENST00000605642 1294 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.2□□□□□ -1.1
PTCH1Q13635 MIR6810-201ENST00000622701 70 ntBASIC8.2□□□□□ -1.1
PTCH1Q13635 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
PTCH1Q13635 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.19□□□□□ -1.1
PTCH1Q13635 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
PTCH1Q13635 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 SNORA56-201ENST00000383966 129 ntBASIC8.19□□□□□ -1.1
PTCH1Q13635 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 OR7E116P-201ENST00000448529 957 ntBASIC8.19□□□□□ -1.1
PTCH1Q13635 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.19□□□□□ -1.1
PTCH1Q13635 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.19□□□□□ -1.1
PTCH1Q13635 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.19□□□□□ -1.1
PTCH1Q13635 OR4H6P-201ENST00000563771 921 ntBASIC8.19□□□□□ -1.1
PTCH1Q13635 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC8.19□□□□□ -1.1
PTCH1Q13635 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTCH1Q13635 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PTCH1Q13635 MIR550A3-201ENST00000390735 95 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.18□□□□□ -1.1
PTCH1Q13635 OR2AO1P-201ENST00000476497 403 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC253576.1-201ENST00000511645 1156 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC021146.10-201ENST00000515628 706 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.18□□□□□ -1.1
PTCH1Q13635 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC011497.2-201ENST00000600255 639 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 AL359513.1-201ENST00000614364 557 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC008115.3-201ENST00000614874 549 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 AC005840.5-201ENST00000619166 599 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
PTCH1Q13635 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
PTCH1Q13635 BRD7P6-201ENST00000431406 1860 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 MRE11P1-201ENST00000464884 2127 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTCH1Q13635 AC009948.3-201ENST00000603415 1798 ntBASIC8.18□□□□□ -1.1
PTCH1Q13635 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.17□□□□□ -1.1
PTCH1Q13635 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.17□□□□□ -1.1
PTCH1Q13635 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 AC079753.1-201ENST00000623243 3868 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.17□□□□□ -1.1
PTCH1Q13635 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 RNA5SP30-201ENST00000365552 115 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.17□□□□□ -1.1
PTCH1Q13635 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 GABARAPL3-201ENST00000412799 354 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AL663074.2-201ENST00000440621 479 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms