Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LTBQ06643 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LTBQ06643 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 SNX18P3-202ENST00000565670 1750 ntBASIC5.73□□□□□ -1.49
LTBQ06643 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.73□□□□□ -1.49
LTBQ06643 AKAP17BP-201ENST00000431706 2719 ntBASIC5.73□□□□□ -1.49
LTBQ06643 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 AP000547.3-204ENST00000588548 2523 ntBASIC5.73□□□□□ -1.49
LTBQ06643 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 IMMTP1-201ENST00000435590 2219 ntBASIC5.73□□□□□ -1.49
LTBQ06643 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 SNORD16-201ENST00000362803 99 ntBASIC5.73□□□□□ -1.49
LTBQ06643 RNA5SP485-201ENST00000365053 119 ntBASIC5.73□□□□□ -1.49
LTBQ06643 SNORA81-201ENST00000408493 178 ntBASIC5.73□□□□□ -1.49
LTBQ06643 RN7SKP199-201ENST00000410325 305 ntBASIC5.73□□□□□ -1.49
LTBQ06643 GABARAPL3-201ENST00000412799 354 ntBASIC5.73□□□□□ -1.49
LTBQ06643 TMA16P2-201ENST00000413187 601 ntBASIC5.73□□□□□ -1.49
LTBQ06643 UBE2V1P14-201ENST00000415815 558 ntBASIC5.73□□□□□ -1.49
LTBQ06643 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 RPS17P17-201ENST00000419392 409 ntBASIC5.73□□□□□ -1.49
LTBQ06643 CHEK2P5-201ENST00000423877 246 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 VN1R20P-201ENST00000425215 966 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AC099782.1-201ENST00000425889 474 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 RN7SL552P-201ENST00000462094 276 ntBASIC5.73□□□□□ -1.49
LTBQ06643 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.73□□□□□ -1.49
LTBQ06643 AC025181.1-201ENST00000477507 416 ntBASIC5.73□□□□□ -1.49
LTBQ06643 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.73□□□□□ -1.49
LTBQ06643 SNORD116-30-201ENST00000516468 85 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 OR4R2P-201ENST00000530815 597 ntBASIC5.73□□□□□ -1.49
LTBQ06643 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 MTND2P13-201ENST00000577438 1039 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AC008536.1-201ENST00000602872 669 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AC067773.1-201ENST00000603284 1094 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 AL122023.1-201ENST00000622847 530 ntBASIC5.73□□□□□ -1.49
LTBQ06643 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.73□□□□□ -1.49
LTBQ06643 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.73□□□□□ -1.49
LTBQ06643 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LTBQ06643 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LTBQ06643 AC007159.1-201ENST00000566529 4706 ntBASIC5.72□□□□□ -1.49
LTBQ06643 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
LTBQ06643 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 FUNDC2P3-201ENST00000334716 533 ntBASIC5.72□□□□□ -1.49
LTBQ06643 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 RN7SKP77-201ENST00000363261 353 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.72□□□□□ -1.49
LTBQ06643 AL360271.1-201ENST00000395679 510 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AC108479.1-201ENST00000431142 427 ntBASIC5.72□□□□□ -1.49
LTBQ06643 GTF3AP6-201ENST00000432585 986 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LTBQ06643 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.72□□□□□ -1.49
LTBQ06643 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.72□□□□□ -1.49
LTBQ06643 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.72□□□□□ -1.49
LTBQ06643 AC084754.1-201ENST00000463466 464 ntBASIC5.72□□□□□ -1.49
LTBQ06643 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.72□□□□□ -1.49
LTBQ06643 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.72□□□□□ -1.49
LTBQ06643 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.72□□□□□ -1.49
LTBQ06643 NATP-201ENST00000523491 878 ntBASIC5.72□□□□□ -1.49
LTBQ06643 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.72□□□□□ -1.49
LTBQ06643 OR4A6P-201ENST00000534364 970 ntBASIC5.72□□□□□ -1.49
LTBQ06643 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.72□□□□□ -1.49
LTBQ06643 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms