Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH12P55289 CYP4F27P-201ENST00000514557 494 ntBASIC5.73□□□□□ -1.49
CDH12P55289 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH12P55289 IGHV4-55-201ENST00000520889 368 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH12P55289 AC131935.1-201ENST00000524621 333 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AC092865.1-201ENST00000544395 1023 ntBASIC5.73□□□□□ -1.49
CDH12P55289 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH12P55289 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH12P55289 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 DNAJC19P3-201ENST00000594491 331 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AP003117.1-201ENST00000602771 554 ntBASIC5.73□□□□□ -1.49
CDH12P55289 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AL390877.1-201ENST00000605704 214 ntBASIC5.73□□□□□ -1.49
CDH12P55289 MIR6883-201ENST00000614952 78 ntBASIC5.73□□□□□ -1.49
CDH12P55289 AC022306.3-201ENST00000619930 550 ntBASIC5.73□□□□□ -1.49
CDH12P55289 MIR6503-201ENST00000622884 86 ntBASIC5.73□□□□□ -1.49
CDH12P55289 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH12P55289 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH12P55289 AC020656.2-201ENST00000613291 5309 ntBASIC5.73□□□□□ -1.49
CDH12P55289 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH12P55289 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH12P55289 AL136520.1-201ENST00000600311 1322 ntBASIC5.73□□□□□ -1.49
CDH12P55289 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH12P55289 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 SNORA27.3-201ENST00000364937 134 ntBASIC5.72□□□□□ -1.49
CDH12P55289 RNA5SP85-201ENST00000365378 119 ntBASIC5.72□□□□□ -1.49
CDH12P55289 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 ARSFP1-201ENST00000398758 477 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 AC073464.3-201ENST00000422564 712 ntBASIC5.72□□□□□ -1.49
CDH12P55289 IGLV3-4-201ENST00000432300 244 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH12P55289 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 AC009963.4-201ENST00000448535 339 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AL034369.1-201ENST00000453808 477 ntBASIC5.72□□□□□ -1.49
CDH12P55289 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 AP003385.3-201ENST00000472498 287 ntBASIC5.72□□□□□ -1.49
CDH12P55289 RN7SL369P-201ENST00000477138 299 ntBASIC5.72□□□□□ -1.49
CDH12P55289 RPS7P11-201ENST00000484240 586 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH12P55289 RN7SKP157-201ENST00000516174 282 ntBASIC5.72□□□□□ -1.49
CDH12P55289 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 OR7E10P-201ENST00000526420 991 ntBASIC5.72□□□□□ -1.49
CDH12P55289 MTND5P21-201ENST00000531961 522 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH12P55289 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH12P55289 MIR4732-201ENST00000581873 76 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC024267.2-201ENST00000582737 417 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH12P55289 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 BNIP3P27-201ENST00000599991 412 ntBASIC5.72□□□□□ -1.49
CDH12P55289 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 AC242628.1-201ENST00000606810 391 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 AC084036.1-201ENST00000609190 508 ntBASIC5.72□□□□□ -1.49
CDH12P55289 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
CDH12P55289 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 LINC00216-201ENST00000623548 1126 ntBASIC5.72□□□□□ -1.49
CDH12P55289 AC068213.1-201ENST00000625124 226 ntBASIC5.72□□□□□ -1.49
CDH12P55289 CLUHP10-201ENST00000631979 980 ntBASIC5.72□□□□□ -1.49
CDH12P55289 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH12P55289 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH12P55289 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH12P55289 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH12P55289 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH12P55289 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDH12P55289 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
CDH12P55289 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.71□□□□□ -1.49
CDH12P55289 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.71□□□□□ -1.49
CDH12P55289 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDH12P55289 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms