Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.21□□□□□ -1.26
NUP98P52948 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 TAS2R6P-201ENST00000605022 826 ntBASIC7.21□□□□□ -1.26
NUP98P52948 AC025574.2-201ENST00000615621 514 ntBASIC7.21□□□□□ -1.26
NUP98P52948 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.21□□□□□ -1.26
NUP98P52948 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.2□□□□□ -1.26
NUP98P52948 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.2□□□□□ -1.26
NUP98P52948 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.2□□□□□ -1.26
NUP98P52948 AC008953.1-201ENST00000497334 318 ntBASIC7.2□□□□□ -1.26
NUP98P52948 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 AC126615.2-201ENST00000553003 515 ntBASIC7.2□□□□□ -1.26
NUP98P52948 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 AC106730.2-201ENST00000566641 540 ntBASIC7.2□□□□□ -1.26
NUP98P52948 AC211433.2-201ENST00000608433 387 ntBASIC7.2□□□□□ -1.26
NUP98P52948 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NUP98P52948 AL161912.4-201ENST00000623889 2468 ntBASIC7.2□□□□□ -1.26
NUP98P52948 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 AL161756.3-201ENST00000641216 2071 ntBASIC7.2□□□□□ -1.26
NUP98P52948 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.2□□□□□ -1.26
NUP98P52948 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.2□□□□□ -1.26
NUP98P52948 SPRYD7P1-201ENST00000443861 570 ntBASIC7.2□□□□□ -1.26
NUP98P52948 MYO5BP2-201ENST00000449815 1277 ntBASIC7.2□□□□□ -1.26
NUP98P52948 AL355032.1-201ENST00000472981 438 ntBASIC7.2□□□□□ -1.26
NUP98P52948 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.2□□□□□ -1.26
NUP98P52948 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.2□□□□□ -1.26
NUP98P52948 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.2□□□□□ -1.26
NUP98P52948 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.2□□□□□ -1.26
NUP98P52948 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.2□□□□□ -1.26
NUP98P52948 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NUP98P52948 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.19□□□□□ -1.26
NUP98P52948 AC061975.7-201ENST00000592016 2692 ntBASIC7.19□□□□□ -1.26
NUP98P52948 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
NUP98P52948 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NUP98P52948 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 RN7SKP28-201ENST00000364770 305 ntBASIC7.19□□□□□ -1.26
NUP98P52948 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.19□□□□□ -1.26
NUP98P52948 NIFKP3-201ENST00000417799 865 ntBASIC7.19□□□□□ -1.26
NUP98P52948 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 AC005033.1-201ENST00000428904 813 ntBASIC7.19□□□□□ -1.26
NUP98P52948 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.19□□□□□ -1.26
NUP98P52948 AC245047.2-201ENST00000441060 530 ntBASIC7.19□□□□□ -1.26
NUP98P52948 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.19□□□□□ -1.26
NUP98P52948 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.19□□□□□ -1.26
NUP98P52948 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.19□□□□□ -1.26
NUP98P52948 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.19□□□□□ -1.26
NUP98P52948 AL512329.2-201ENST00000607350 548 ntBASIC7.19□□□□□ -1.26
NUP98P52948 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.19□□□□□ -1.26
NUP98P52948 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.19□□□□□ -1.26
NUP98P52948 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
NUP98P52948 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NUP98P52948 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NUP98P52948 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NUP98P52948 AL360271.1-201ENST00000395679 510 ntBASIC7.18□□□□□ -1.26
NUP98P52948 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.18□□□□□ -1.26
NUP98P52948 NENFP1-201ENST00000419476 466 ntBASIC7.18□□□□□ -1.26
NUP98P52948 OR2AO1P-201ENST00000476497 403 ntBASIC7.18□□□□□ -1.26
NUP98P52948 AC008410.1-201ENST00000483777 339 ntBASIC7.18□□□□□ -1.26
NUP98P52948 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.18□□□□□ -1.26
NUP98P52948 AC139697.1-201ENST00000548429 745 ntBASIC7.18□□□□□ -1.26
NUP98P52948 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.18□□□□□ -1.26
NUP98P52948 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
NUP98P52948 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 DOCK11P1-201ENST00000553480 5932 ntBASIC7.18□□□□□ -1.26
NUP98P52948 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 AC114876.1-201ENST00000490962 1366 ntBASIC7.18□□□□□ -1.26
NUP98P52948 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NUP98P52948 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
NUP98P52948 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NUP98P52948 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms