Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC119403.2-201ENST00000590960 598 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 COX6CP7-201ENST00000597056 208 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.61□□□□□ -1.35
CLCN3P51790 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 AC127024.6-201ENST00000621598 424 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 OR8G3P-202ENST00000641572 1255 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CLCN3P51790 AC005034.3-201ENST00000604845 1747 ntBASIC6.61□□□□□ -1.35
CLCN3P51790 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.61□□□□□ -1.35
CLCN3P51790 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
CLCN3P51790 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLCN3P51790 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.6□□□□□ -1.35
CLCN3P51790 AL662795.2-201ENST00000624252 3706 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 AC015689.2-201ENST00000528172 1738 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 RN7SKP128-201ENST00000364270 303 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 RN7SKP81-201ENST00000365603 331 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CLCN3P51790 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC087752.1-201ENST00000391360 558 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC007562.1-201ENST00000421819 517 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 AC007568.1-201ENST00000422912 471 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 AL445928.1-201ENST00000435545 222 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 RPS7P3-201ENST00000443360 580 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 AC023274.2-201ENST00000445264 521 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 RPL36AP39-201ENST00000445859 318 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.6□□□□□ -1.35
CLCN3P51790 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 RAB28P2-201ENST00000454299 641 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 AP000648.1-201ENST00000529682 397 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 AL356801.1-201ENST00000559320 294 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.6□□□□□ -1.35
CLCN3P51790 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.6□□□□□ -1.35
CLCN3P51790 AL031601.1-201ENST00000605702 394 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.6□□□□□ -1.35
CLCN3P51790 AP003400.2-201ENST00000624036 666 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CLCN3P51790 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CLCN3P51790 PARP4P2-201ENST00000446672 3326 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 WDR95P-201ENST00000425638 1542 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 SHQ1P1-201ENST00000437111 1544 ntBASIC6.6□□□□□ -1.35
CLCN3P51790 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLCN3P51790 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLCN3P51790 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.59□□□□□ -1.35
CLCN3P51790 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLCN3P51790 FUNDC2P3-201ENST00000334716 533 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLCN3P51790 SNORD8-201ENST00000363915 110 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLCN3P51790 AL512422.1-201ENST00000407033 553 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.59□□□□□ -1.35
CLCN3P51790 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.59□□□□□ -1.35
CLCN3P51790 AL161636.2-201ENST00000445179 927 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.59□□□□□ -1.35
CLCN3P51790 OR7L1P-201ENST00000456181 380 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 NXT1P1-201ENST00000458481 316 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AC018638.3-201ENST00000461273 132 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 RN7SL352P-201ENST00000466002 277 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 RN7SL174P-201ENST00000475578 289 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 RN7SL57P-201ENST00000493687 290 ntBASIC6.59□□□□□ -1.35
CLCN3P51790 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.59□□□□□ -1.35
CLCN3P51790 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.59□□□□□ -1.35
CLCN3P51790 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLCN3P51790 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms