Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.8□□□□□ -1.48
CENPAP49450 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 VN1R31P-201ENST00000417498 730 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RNF19BPX-201ENST00000426224 625 ntBASIC5.8□□□□□ -1.48
CENPAP49450 NPM1P26-201ENST00000426339 738 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AL138479.1-201ENST00000426913 484 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC092646.1-201ENST00000427142 901 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.8□□□□□ -1.48
CENPAP49450 TXNP2-201ENST00000443918 295 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 RN7SKP198-201ENST00000459286 306 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RN7SL552P-201ENST00000462094 276 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RPL23AP64-201ENST00000469465 435 ntBASIC5.8□□□□□ -1.48
CENPAP49450 OR11I1P-201ENST00000486033 954 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC114728.1-201ENST00000488289 483 ntBASIC5.8□□□□□ -1.48
CENPAP49450 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CENPAP49450 IGKV1D-22-201ENST00000518953 324 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC009879.1-201ENST00000520029 839 ntBASIC5.8□□□□□ -1.48
CENPAP49450 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.8□□□□□ -1.48
CENPAP49450 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.8□□□□□ -1.48
CENPAP49450 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.8□□□□□ -1.48
CENPAP49450 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.8□□□□□ -1.48
CENPAP49450 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 AL360012.1-201ENST00000602813 131 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC105148.1-201ENST00000604961 409 ntBASIC5.8□□□□□ -1.48
CENPAP49450 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 AL512413.1-201ENST00000606489 382 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AP000240.1-201ENST00000609910 452 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 AC106858.1-201ENST00000637497 429 ntBASIC5.8□□□□□ -1.48
CENPAP49450 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CENPAP49450 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 AC011369.2-201ENST00000624423 1567 ntBASIC5.8□□□□□ -1.48
CENPAP49450 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 AC010132.4-201ENST00000569883 1368 ntBASIC5.8□□□□□ -1.48
CENPAP49450 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 AC092724.1-201ENST00000624623 3397 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.79□□□□□ -1.48
CENPAP49450 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CENPAP49450 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CENPAP49450 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.79□□□□□ -1.48
CENPAP49450 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.79□□□□□ -1.48
CENPAP49450 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CENPAP49450 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 LCN1P2-201ENST00000372030 223 ntBASIC5.79□□□□□ -1.48
CENPAP49450 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 AC007068.1-201ENST00000396690 844 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AL139100.1-201ENST00000408001 498 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC116036.1-201ENST00000412199 367 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 RPL18AP14-201ENST00000417685 526 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.79□□□□□ -1.48
CENPAP49450 RPS17P17-201ENST00000419392 409 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AHCYP8-201ENST00000425108 209 ntBASIC5.79□□□□□ -1.48
CENPAP49450 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.79□□□□□ -1.48
CENPAP49450 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.79□□□□□ -1.48
CENPAP49450 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 AL158214.1-201ENST00000444423 404 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AL356133.1-201ENST00000444762 372 ntBASIC5.79□□□□□ -1.48
CENPAP49450 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.79□□□□□ -1.48
CENPAP49450 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.79□□□□□ -1.48
CENPAP49450 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CENPAP49450 RPL19P11-201ENST00000495944 589 ntBASIC5.79□□□□□ -1.48
CENPAP49450 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 PCNAP1-201ENST00000505363 709 ntBASIC5.79□□□□□ -1.48
CENPAP49450 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 SCARNA5-201ENST00000516201 276 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.79□□□□□ -1.48
CENPAP49450 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CENPAP49450 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 AL358913.1-201ENST00000554342 121 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.79□□□□□ -1.48
CENPAP49450 NPM1P5-201ENST00000557228 838 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.79□□□□□ -1.48
CENPAP49450 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.79□□□□□ -1.48
CENPAP49450 AC063977.7-201ENST00000594454 337 ntBASIC5.79□□□□□ -1.48
CENPAP49450 SNORD96A-201ENST00000606577 79 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC005514.1-201ENST00000623521 208 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC117503.3-201ENST00000623811 601 ntBASIC5.79□□□□□ -1.48
CENPAP49450 AC061999.1-201ENST00000624454 177 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms