Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU105B-201ENST00000364478 208 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AL096829.1-201ENST00000413677 457 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 OR5W1P-201ENST00000423705 938 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RPS3AP38-201ENST00000435889 763 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RPSAP41-201ENST00000439695 860 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 CUBNP2-201ENST00000443534 1139 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 Z83838.1-202ENST00000456225 839 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 ACA64.4-201ENST00000459070 127 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RNU7-157P-201ENST00000459600 66 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RN7SL552P-201ENST00000462094 276 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 RPL12P30-201ENST00000488389 499 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 HMGN1P16-201ENST00000508308 283 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 ZNF519P4-201ENST00000514008 125 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC023389.2-201ENST00000580031 955 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CR1P49238 AL583832.1-201ENST00000603227 784 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 uc_338.26-201ENST00000612659 160 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AC012676.3-201ENST00000614983 479 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RFPL4AP6-201ENST00000616792 846 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 RNA5SP439-201ENST00000617595 124 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 MIR6823-201ENST00000622118 61 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.28□□□□□ -1.56
CX3CR1P49238 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 AC022325.1-201ENST00000502748 2199 ntBASIC5.28□□□□□ -1.56
CX3CR1P49238 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.28□□□□□ -1.56
CX3CR1P49238 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CX3CR1P49238 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.27□□□□□ -1.57
CX3CR1P49238 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CR1P49238 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CR1P49238 THAP12P9-201ENST00000503971 2360 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 AC083837.1-201ENST00000565297 2994 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CX3CR1P49238 AL132875.1-201ENST00000403623 949 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 AC009506.2-201ENST00000420635 840 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 MRPS21P2-201ENST00000424704 264 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 KRT8P51-201ENST00000438938 274 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 AL590004.3-202ENST00000445883 451 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 ZNF619P1-201ENST00000446539 752 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 AC016027.4-201ENST00000450866 277 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 OSTCP1-201ENST00000455507 450 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CR1P49238 TRBV5-2-201ENST00000489095 273 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CX3CR1P49238 MRPS5P3-201ENST00000515577 166 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 RN7SKP288-201ENST00000516227 268 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 RNA5SP434-201ENST00000516647 121 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 AC244502.2-201ENST00000543361 851 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CR1P49238 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.27□□□□□ -1.57
CX3CR1P49238 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 CASC19-260ENST00000641828 2001 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.27□□□□□ -1.57
CX3CR1P49238 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CX3CR1P49238 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.27□□□□□ -1.57
CX3CR1P49238 AC239868.2-201ENST00000564237 4527 ntBASIC5.27□□□□□ -1.57
CX3CR1P49238 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CX3CR1P49238 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms