Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC007423.1-201ENST00000605009 627 ntBASIC7.01□□□□□ -1.29
TM4SF4P48230 AC015802.5-201ENST00000607478 399 ntBASIC7.01□□□□□ -1.29
TM4SF4P48230 AC009032.1-201ENST00000617574 431 ntBASIC7.01□□□□□ -1.29
TM4SF4P48230 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.01□□□□□ -1.29
TM4SF4P48230 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF4P48230 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF4P48230 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.01□□□□□ -1.29
TM4SF4P48230 AC079753.1-201ENST00000623243 3868 ntBASIC7.01□□□□□ -1.29
TM4SF4P48230 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 UGT2B25P-201ENST00000511504 1586 ntBASIC7□□□□□ -1.29
TM4SF4P48230 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7□□□□□ -1.29
TM4SF4P48230 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 MIR365B-201ENST00000362317 111 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AL353625.1-202ENST00000366273 571 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AC007068.1-201ENST00000396690 844 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AL445238.1-204ENST00000400311 463 ntBASIC7□□□□□ -1.29
TM4SF4P48230 RN7SKP125-201ENST00000410481 302 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF4P48230 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 FMO7P-201ENST00000436045 768 ntBASIC7□□□□□ -1.29
TM4SF4P48230 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7□□□□□ -1.29
TM4SF4P48230 CYCSP51-201ENST00000443545 318 ntBASIC7□□□□□ -1.29
TM4SF4P48230 EEF1B2P5-201ENST00000444820 548 ntBASIC7□□□□□ -1.29
TM4SF4P48230 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7□□□□□ -1.29
TM4SF4P48230 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 AC016027.4-201ENST00000450866 277 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AC005532.2-201ENST00000467154 373 ntBASIC7□□□□□ -1.29
TM4SF4P48230 RPS17P15-201ENST00000475609 349 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AC004453.1-201ENST00000487895 408 ntBASIC7□□□□□ -1.29
TM4SF4P48230 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
TM4SF4P48230 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 HIGD1AP5-201ENST00000529959 259 ntBASIC7□□□□□ -1.29
TM4SF4P48230 IGBP1P1-201ENST00000554337 1009 ntBASIC7□□□□□ -1.29
TM4SF4P48230 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF4P48230 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF4P48230 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 AC007683.2-201ENST00000624681 714 ntBASIC7□□□□□ -1.29
TM4SF4P48230 CASC19-264ENST00000641912 1184 ntBASIC7□□□□□ -1.29
TM4SF4P48230 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
TM4SF4P48230 GUCY1B2-204ENST00000531898 1979 ntBASIC7□□□□□ -1.29
TM4SF4P48230 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 SPATA31B1P-201ENST00000434692 4016 ntBASIC7□□□□□ -1.29
TM4SF4P48230 AL008638.3-201ENST00000623027 5182 ntBASIC7□□□□□ -1.29
TM4SF4P48230 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
TM4SF4P48230 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF4P48230 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF4P48230 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.99□□□□□ -1.29
TM4SF4P48230 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TM4SF4P48230 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.99□□□□□ -1.29
TM4SF4P48230 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TM4SF4P48230 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.99□□□□□ -1.29
TM4SF4P48230 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TM4SF4P48230 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TM4SF4P48230 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TM4SF4P48230 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TM4SF4P48230 MTHFD2P5-201ENST00000320415 844 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 RNU11-6P-201ENST00000391127 133 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 USP9YP19-201ENST00000412165 485 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 OR6E1P-201ENST00000414424 923 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 TRIM60P17-201ENST00000415181 719 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.99□□□□□ -1.29
TM4SF4P48230 RBMY2KP-201ENST00000418221 992 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 NME1P1-201ENST00000420914 382 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 RPS15AP30-201ENST00000420976 390 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 TNPO1P1-201ENST00000423641 1138 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.99□□□□□ -1.29
TM4SF4P48230 ZFAND6P1-201ENST00000434138 605 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 AL645937.3-201ENST00000453647 936 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 AC091685.2-201ENST00000454924 864 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 RWDD4P1-201ENST00000488019 565 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.99□□□□□ -1.29
TM4SF4P48230 SSX8-201ENST00000506270 579 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.99□□□□□ -1.29
TM4SF4P48230 IGLV3-6-201ENST00000523937 250 ntBASIC6.99□□□□□ -1.29
TM4SF4P48230 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms