Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC005726.4-201ENST00000582858 458 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 RPL29P33-201ENST00000587474 316 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 NDUFB9P1-201ENST00000604683 510 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC114477.1-201ENST00000605097 605 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AL356608.1-201ENST00000610034 820 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC015819.1-201ENST00000613588 663 ntBASIC5.19□□□□□ -1.58
CDX1P47902 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 OR7A1P-202ENST00000641542 1158 ntBASIC5.19□□□□□ -1.58
CDX1P47902 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.19□□□□□ -1.58
CDX1P47902 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 SMG1P5-202ENST00000529428 4219 ntBASIC5.18□□□□□ -1.58
CDX1P47902 SMG1P2-201ENST00000566127 4221 ntBASIC5.18□□□□□ -1.58
CDX1P47902 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDX1P47902 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
CDX1P47902 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 RNU6-1251P-201ENST00000364502 107 ntBASIC5.18□□□□□ -1.58
CDX1P47902 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 RNU6-1263P-201ENST00000384601 106 ntBASIC5.18□□□□□ -1.58
CDX1P47902 RNA5SP105-201ENST00000391123 113 ntBASIC5.18□□□□□ -1.58
CDX1P47902 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 RPL10P10-201ENST00000403509 664 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AL133260.1-201ENST00000405720 405 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AMZ2P2-201ENST00000406819 1057 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AL929472.1-201ENST00000417484 429 ntBASIC5.18□□□□□ -1.58
CDX1P47902 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 AC106901.1-201ENST00000425086 698 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC097721.1-201ENST00000427150 1253 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 AC128677.1-201ENST00000436016 442 ntBASIC5.18□□□□□ -1.58
CDX1P47902 ARAFP2-201ENST00000440565 559 ntBASIC5.18□□□□□ -1.58
CDX1P47902 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 AC099670.1-201ENST00000455141 783 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AL355032.1-201ENST00000472981 438 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC007688.1-201ENST00000475592 759 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC025181.1-201ENST00000477507 416 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC044810.1-201ENST00000480271 711 ntBASIC5.18□□□□□ -1.58
CDX1P47902 OR11I1P-201ENST00000486033 954 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.18□□□□□ -1.58
CDX1P47902 AC087272.1-201ENST00000523624 533 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.18□□□□□ -1.58
CDX1P47902 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.18□□□□□ -1.58
CDX1P47902 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CDX1P47902 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 AC012414.2-201ENST00000559474 187 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC106785.4-201ENST00000569492 412 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.18□□□□□ -1.58
CDX1P47902 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 WBP1LP11-201ENST00000586141 328 ntBASIC5.18□□□□□ -1.58
CDX1P47902 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.18□□□□□ -1.58
CDX1P47902 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CDX1P47902 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 AC009032.1-201ENST00000617574 431 ntBASIC5.18□□□□□ -1.58
CDX1P47902 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 AC004808.2-201ENST00000627965 773 ntBASIC5.18□□□□□ -1.58
CDX1P47902 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 OR8A1-204ENST00000642111 1145 ntBASIC5.18□□□□□ -1.58
CDX1P47902 GUCY1B2-204ENST00000531898 1979 ntBASIC5.18□□□□□ -1.58
CDX1P47902 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.18□□□□□ -1.58
CDX1P47902 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDX1P47902 PSMC1P4-201ENST00000515236 1327 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms