Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 AP002512.4-202ENST00000641599 4530 ntBASIC5.61□□□□□ -1.51
RFC3P40938 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 RNA5SP375-201ENST00000362975 119 ntBASIC5.61□□□□□ -1.51
RFC3P40938 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 MIR433-201ENST00000384837 93 ntBASIC5.61□□□□□ -1.51
RFC3P40938 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 SEPT7P2-202ENST00000398921 823 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 NAP1L4P2-201ENST00000425958 899 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC3P40938 USP9YP3-201ENST00000434481 1766 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 AC016908.1-201ENST00000442571 1219 ntBASIC5.61□□□□□ -1.51
RFC3P40938 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC3P40938 GAPDHP23-201ENST00000444823 993 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC3P40938 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC3P40938 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC3P40938 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC3P40938 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 MTCO1P28-201ENST00000574177 1528 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC3P40938 AC139426.3-201ENST00000605648 2059 ntBASIC5.61□□□□□ -1.51
RFC3P40938 AC073488.3-201ENST00000631611 778 ntBASIC5.61□□□□□ -1.51
RFC3P40938 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFC3P40938 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC3P40938 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC3P40938 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
RFC3P40938 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 RPS2P45-201ENST00000469997 2057 ntBASIC5.6□□□□□ -1.51
RFC3P40938 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 AC011369.2-201ENST00000624423 1567 ntBASIC5.6□□□□□ -1.51
RFC3P40938 CASC19-238ENST00000641523 1558 ntBASIC5.6□□□□□ -1.51
RFC3P40938 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC3P40938 OR7E25P-201ENST00000344844 931 ntBASIC5.6□□□□□ -1.51
RFC3P40938 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 RNA5SP273-201ENST00000362484 113 ntBASIC5.6□□□□□ -1.51
RFC3P40938 RNA5SP477-201ENST00000362639 119 ntBASIC5.6□□□□□ -1.51
RFC3P40938 RN7SKP78-201ENST00000364711 318 ntBASIC5.6□□□□□ -1.51
RFC3P40938 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 SUGT1P2-201ENST00000379452 992 ntBASIC5.6□□□□□ -1.51
RFC3P40938 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC3P40938 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.6□□□□□ -1.51
RFC3P40938 SEPT14P12-201ENST00000442280 560 ntBASIC5.6□□□□□ -1.51
RFC3P40938 ZNF619P1-201ENST00000446539 752 ntBASIC5.6□□□□□ -1.51
RFC3P40938 FTLP8-201ENST00000446770 267 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 SNX18P26-201ENST00000458433 740 ntBASIC5.6□□□□□ -1.51
RFC3P40938 ACA64.1-201ENST00000459171 127 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AC073594.1-201ENST00000462065 364 ntBASIC5.6□□□□□ -1.51
RFC3P40938 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 PRMT5P1-201ENST00000514351 598 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC3P40938 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 NPM1P5-201ENST00000557228 838 ntBASIC5.6□□□□□ -1.51
RFC3P40938 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC3P40938 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms