Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.99□□□□□ -1.45
RPA3P35244 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.99□□□□□ -1.45
RPA3P35244 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPA3P35244 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.99□□□□□ -1.45
RPA3P35244 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.99□□□□□ -1.45
RPA3P35244 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPA3P35244 SDC4P-201ENST00000453285 601 ntBASIC5.99□□□□□ -1.45
RPA3P35244 FRG2FP-204ENST00000453982 852 ntBASIC5.99□□□□□ -1.45
RPA3P35244 AL117692.1-201ENST00000494283 713 ntBASIC5.99□□□□□ -1.45
RPA3P35244 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.99□□□□□ -1.45
RPA3P35244 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 AC090958.1-201ENST00000511122 351 ntBASIC5.99□□□□□ -1.45
RPA3P35244 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.99□□□□□ -1.45
RPA3P35244 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.99□□□□□ -1.45
RPA3P35244 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.99□□□□□ -1.45
RPA3P35244 AC007346.2-201ENST00000564816 892 ntBASIC5.99□□□□□ -1.45
RPA3P35244 AC090826.1-203ENST00000569235 490 ntBASIC5.99□□□□□ -1.45
RPA3P35244 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.99□□□□□ -1.45
RPA3P35244 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.99□□□□□ -1.45
RPA3P35244 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.99□□□□□ -1.45
RPA3P35244 AP005136.2-201ENST00000583253 1049 ntBASIC5.99□□□□□ -1.45
RPA3P35244 uc_338.31-201ENST00000615595 186 ntBASIC5.99□□□□□ -1.45
RPA3P35244 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RPA3P35244 AL357140.4-201ENST00000636827 412 ntBASIC5.99□□□□□ -1.45
RPA3P35244 CASC19-274ENST00000642018 970 ntBASIC5.99□□□□□ -1.45
RPA3P35244 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPA3P35244 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RPA3P35244 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RPA3P35244 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
RPA3P35244 EIF3EP1-201ENST00000433978 1316 ntBASIC5.99□□□□□ -1.45
RPA3P35244 AC004656.1-201ENST00000568479 4951 ntBASIC5.98□□□□□ -1.45
RPA3P35244 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RPA3P35244 RNA5SP156-201ENST00000410250 110 ntBASIC5.98□□□□□ -1.45
RPA3P35244 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.98□□□□□ -1.45
RPA3P35244 RPS15AP30-201ENST00000420976 390 ntBASIC5.98□□□□□ -1.45
RPA3P35244 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.98□□□□□ -1.45
RPA3P35244 AC099670.2-201ENST00000435130 321 ntBASIC5.98□□□□□ -1.45
RPA3P35244 AC010240.2-201ENST00000445363 1205 ntBASIC5.98□□□□□ -1.45
RPA3P35244 HMGB1P7-201ENST00000450921 612 ntBASIC5.98□□□□□ -1.45
RPA3P35244 PDCL3P4-201ENST00000489621 720 ntBASIC5.98□□□□□ -1.45
RPA3P35244 RPL12P7-201ENST00000493832 494 ntBASIC5.98□□□□□ -1.45
RPA3P35244 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.98□□□□□ -1.45
RPA3P35244 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.98□□□□□ -1.45
RPA3P35244 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.98□□□□□ -1.45
RPA3P35244 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.98□□□□□ -1.45
RPA3P35244 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RPA3P35244 AC092681.3-201ENST00000609463 678 ntBASIC5.98□□□□□ -1.45
RPA3P35244 MIR6780B-201ENST00000610307 79 ntBASIC5.98□□□□□ -1.45
RPA3P35244 AC096708.4-201ENST00000620563 552 ntBASIC5.98□□□□□ -1.45
RPA3P35244 AC022400.9-201ENST00000623633 273 ntBASIC5.98□□□□□ -1.45
RPA3P35244 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
RPA3P35244 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RPA3P35244 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.98□□□□□ -1.45
RPA3P35244 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.98□□□□□ -1.45
RPA3P35244 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPA3P35244 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPA3P35244 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPA3P35244 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPA3P35244 AC089998.1-201ENST00000548575 3141 ntBASIC5.97□□□□□ -1.45
RPA3P35244 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RPA3P35244 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPA3P35244 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RPA3P35244 AC119674.1-202ENST00000641333 1860 ntBASIC5.97□□□□□ -1.45
RPA3P35244 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RPA3P35244 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RPA3P35244 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPA3P35244 RNU105B-201ENST00000364478 208 ntBASIC5.97□□□□□ -1.45
RPA3P35244 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.97□□□□□ -1.45
RPA3P35244 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.97□□□□□ -1.45
RPA3P35244 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.97□□□□□ -1.45
RPA3P35244 AL590004.3-202ENST00000445883 451 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC093166.3-201ENST00000448785 303 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC118758.1-202ENST00000454719 225 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC021006.1-201ENST00000489849 553 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.97□□□□□ -1.45
RPA3P35244 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.97□□□□□ -1.45
RPA3P35244 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.97□□□□□ -1.45
RPA3P35244 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.97□□□□□ -1.45
RPA3P35244 OR8Q1P-201ENST00000526467 655 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC036111.2-201ENST00000533247 901 ntBASIC5.97□□□□□ -1.45
RPA3P35244 AC090424.1-201ENST00000535243 736 ntBASIC5.97□□□□□ -1.45
RPA3P35244 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.97□□□□□ -1.45
RPA3P35244 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.97□□□□□ -1.45
RPA3P35244 MRPS21P8-201ENST00000569196 235 ntBASIC5.97□□□□□ -1.45
RPA3P35244 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.97□□□□□ -1.45
RPA3P35244 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms