Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.38□□□□□ -1.39
CASQ1P31415 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.38□□□□□ -1.39
CASQ1P31415 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CASQ1P31415 RN7SKP198-201ENST00000459286 306 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 AL603882.1-201ENST00000463059 681 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 RPS3AP49-201ENST00000472161 790 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.38□□□□□ -1.39
CASQ1P31415 RN7SKP64-201ENST00000517206 328 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.38□□□□□ -1.39
CASQ1P31415 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.38□□□□□ -1.39
CASQ1P31415 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.38□□□□□ -1.39
CASQ1P31415 AC126323.4-201ENST00000566935 234 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.38□□□□□ -1.39
CASQ1P31415 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
CASQ1P31415 AC063977.7-201ENST00000594454 337 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 NDUFB9P1-201ENST00000604683 510 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 SNORA74.4-201ENST00000607595 199 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 AC007786.3-201ENST00000615154 596 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CASQ1P31415 SAMMSON-213ENST00000641336 1521 ntBASIC6.38□□□□□ -1.39
CASQ1P31415 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASQ1P31415 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASQ1P31415 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CASQ1P31415 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASQ1P31415 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CASQ1P31415 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC019178.1-201ENST00000392337 440 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AL358178.1-201ENST00000407698 397 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 AC024937.2-201ENST00000411669 1242 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AC079809.1-201ENST00000415468 276 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CASQ1P31415 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 MTND6P5-201ENST00000448266 512 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 RPS23P9-201ENST00000448848 438 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 RNU7-157P-201ENST00000459600 66 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.37□□□□□ -1.39
CASQ1P31415 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 OR4A43P-201ENST00000532938 908 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.37□□□□□ -1.39
CASQ1P31415 AL353729.2-201ENST00000605859 1249 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 AL034546.1-201ENST00000623740 3693 ntBASIC6.37□□□□□ -1.39
CASQ1P31415 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.37□□□□□ -1.39
CASQ1P31415 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASQ1P31415 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.37□□□□□ -1.39
CASQ1P31415 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CASQ1P31415 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.36□□□□□ -1.39
CASQ1P31415 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CASQ1P31415 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CASQ1P31415 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.36□□□□□ -1.39
CASQ1P31415 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CASQ1P31415 OR10R3P-201ENST00000361688 942 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 RNU1-146P-201ENST00000364015 165 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 RNA5SP427-201ENST00000365323 119 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.36□□□□□ -1.39
CASQ1P31415 RPS15AP30-201ENST00000420976 390 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 E2F6P1-201ENST00000428850 745 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 RPSAP65-201ENST00000429660 595 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.36□□□□□ -1.39
CASQ1P31415 AC096632.2-201ENST00000438139 1239 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 SOCS5P1-201ENST00000440415 949 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 E2F6P3-201ENST00000441743 743 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 AL139135.2-201ENST00000445040 433 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 AC010240.2-201ENST00000445363 1205 ntBASIC6.36□□□□□ -1.39
CASQ1P31415 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.36□□□□□ -1.39
CASQ1P31415 RPS12P20-201ENST00000464109 380 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms