Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC13P31276 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC13P31276 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC13P31276 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
HOXC13P31276 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
HOXC13P31276 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC13P31276 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 RNA5SP346-201ENST00000363541 121 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 SNORD8-201ENST00000363915 110 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 RNA5SP242-201ENST00000364171 118 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 RN7SKP186-201ENST00000365371 303 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC13P31276 AP003170.5-201ENST00000397185 335 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AL445238.1-204ENST00000400311 463 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AL096800.1-201ENST00000405326 893 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 BX510359.3-201ENST00000422168 306 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 CYCSP51-201ENST00000443545 318 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 SEPT7P3-201ENST00000455017 621 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC098847.1-201ENST00000473094 348 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC007998.1-201ENST00000474156 672 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC060775.1-201ENST00000518241 520 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 MIR4443-201ENST00000585052 53 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 AC022106.1-201ENST00000612834 766 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC073575.2-201ENST00000614212 627 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC13P31276 AP001885.1-201ENST00000621658 558 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC004836.1-201ENST00000623032 634 ntBASIC6.46□□□□□ -1.38
HOXC13P31276 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC13P31276 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC13P31276 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC13P31276 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC13P31276 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC13P31276 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC13P31276 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC13P31276 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC13P31276 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC13P31276 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC13P31276 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC13P31276 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC13P31276 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC13P31276 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC13P31276 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
HOXC13P31276 TTC41P-205ENST00000551270 3963 ntBASIC6.45□□□□□ -1.38
HOXC13P31276 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC13P31276 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC13P31276 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC13P31276 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC13P31276 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC13P31276 AC073072.2-201ENST00000447425 348 ntBASIC6.45□□□□□ -1.38
HOXC13P31276 AC103563.5-201ENST00000455643 364 ntBASIC6.45□□□□□ -1.38
HOXC13P31276 RANP2-201ENST00000456833 229 ntBASIC6.45□□□□□ -1.38
HOXC13P31276 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC13P31276 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HOXC13P31276 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC13P31276 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC13P31276 AC026782.2-201ENST00000510845 636 ntBASIC6.45□□□□□ -1.38
HOXC13P31276 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC13P31276 RNA5SP438-201ENST00000516561 112 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms