Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MTCO1P31-201ENST00000506355 492 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 RN7SKP157-201ENST00000516174 282 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.41□□□□□ -1.22
CNGA1P29973 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 MIR3614-201ENST00000581261 86 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 AC090330.1-201ENST00000588646 764 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 AC006116.7-201ENST00000590141 756 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AC245389.2-201ENST00000616023 576 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AL645927.2-201ENST00000618350 349 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AC242843.1-201ENST00000618702 573 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 RMST_5.1-201ENST00000618704 126 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 AC019080.5-201ENST00000624891 757 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CNGA1P29973 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 AC112255.1-201ENST00000624070 2493 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 HSPA8P19-201ENST00000505359 1517 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 KARSP1-201ENST00000451871 1752 ntBASIC7.41□□□□□ -1.22
CNGA1P29973 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
CNGA1P29973 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CNGA1P29973 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 MAPK10-383ENST00000642032 3390 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.4□□□□□ -1.22
CNGA1P29973 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
CNGA1P29973 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC079949.2-201ENST00000617117 2933 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 AP000568.1-201ENST00000282964 442 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 RNA5SP65-201ENST00000363166 119 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 RNU6-650P-201ENST00000365658 111 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 RN7SKP206-201ENST00000410823 293 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.4□□□□□ -1.22
CNGA1P29973 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 PNKDP1-201ENST00000435914 430 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.4□□□□□ -1.22
CNGA1P29973 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 MTND6P32-201ENST00000457611 483 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC010374.2-201ENST00000512933 535 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AL133399.1-201ENST00000527476 298 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC104072.1-201ENST00000568817 668 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.4□□□□□ -1.22
CNGA1P29973 RN7SL404P-201ENST00000582421 281 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC108865.2-201ENST00000606881 432 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AL096803.3-201ENST00000609032 532 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC010333.3-201ENST00000615100 402 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 MIR6085-201ENST00000618314 110 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AL138955.1-201ENST00000622881 1040 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AP000943.4-201ENST00000622912 357 ntBASIC7.4□□□□□ -1.22
CNGA1P29973 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.4□□□□□ -1.22
CNGA1P29973 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNGA1P29973 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CNGA1P29973 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.4□□□□□ -1.23
CNGA1P29973 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.23
CNGA1P29973 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.4□□□□□ -1.23
CNGA1P29973 AC020658.2-201ENST00000559030 4020 ntBASIC7.4□□□□□ -1.23
CNGA1P29973 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNGA1P29973 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CNGA1P29973 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CNGA1P29973 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CNGA1P29973 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms