Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ATF4P18848 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ATF4P18848 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ATF4P18848 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ATF4P18848 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.46□□□□□ -1.38
ATF4P18848 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ATF4P18848 AL442128.2-201ENST00000620246 1824 ntBASIC6.46□□□□□ -1.38
ATF4P18848 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 TRIM51GP-201ENST00000534741 1350 ntBASIC6.45□□□□□ -1.38
ATF4P18848 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 AKAP17BP-201ENST00000431706 2719 ntBASIC6.45□□□□□ -1.38
ATF4P18848 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 AC127070.3-201ENST00000503695 3263 ntBASIC6.45□□□□□ -1.38
ATF4P18848 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
ATF4P18848 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ATF4P18848 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 RNU6-500P-201ENST00000362349 107 ntBASIC6.45□□□□□ -1.38
ATF4P18848 RNU1-24P-201ENST00000364285 165 ntBASIC6.45□□□□□ -1.38
ATF4P18848 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 Y_RNA.559-201ENST00000384686 107 ntBASIC6.45□□□□□ -1.38
ATF4P18848 RNU6-192P-201ENST00000391253 100 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AL109918.1-202ENST00000406724 436 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 BOLA3P4-201ENST00000418151 400 ntBASIC6.45□□□□□ -1.38
ATF4P18848 GAPDHP57-201ENST00000424400 585 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC244034.1-201ENST00000428027 792 ntBASIC6.45□□□□□ -1.38
ATF4P18848 RPS26P40-201ENST00000435209 294 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC242426.1-201ENST00000435270 960 ntBASIC6.45□□□□□ -1.38
ATF4P18848 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 MUPP-201ENST00000438111 566 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 ASS1P4-201ENST00000439462 1234 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 OR51P1P-201ENST00000447547 942 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 RPS4XP12-201ENST00000461747 709 ntBASIC6.45□□□□□ -1.38
ATF4P18848 RPS12P20-201ENST00000464109 380 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC110994.1-201ENST00000468519 406 ntBASIC6.45□□□□□ -1.38
ATF4P18848 SETP11-201ENST00000473027 690 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC6.45□□□□□ -1.38
ATF4P18848 AC091965.2-201ENST00000512324 613 ntBASIC6.45□□□□□ -1.38
ATF4P18848 SCARNA6.1-201ENST00000516989 238 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC138356.2-201ENST00000521192 667 ntBASIC6.45□□□□□ -1.38
ATF4P18848 IGLVI-42-201ENST00000522485 381 ntBASIC6.45□□□□□ -1.38
ATF4P18848 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC087639.1-201ENST00000560974 920 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC137800.1-202ENST00000562098 446 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AC090774.3-201ENST00000578666 742 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.45□□□□□ -1.38
ATF4P18848 AP005262.1-201ENST00000582646 997 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC067796.1-201ENST00000586795 496 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC008759.1-201ENST00000589783 983 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AF146191.1-201ENST00000604941 889 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AP000254.1-201ENST00000609934 520 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC027271.1-201ENST00000610270 610 ntBASIC6.45□□□□□ -1.38
ATF4P18848 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 AC092656.1-203ENST00000624134 423 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC084035.1-201ENST00000634543 607 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 AC097461.1-201ENST00000568928 2821 ntBASIC6.45□□□□□ -1.38
ATF4P18848 AC073365.1-203ENST00000641055 1992 ntBASIC6.45□□□□□ -1.38
ATF4P18848 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 AL355377.1-201ENST00000621125 1653 ntBASIC6.45□□□□□ -1.38
ATF4P18848 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC6.45□□□□□ -1.38
ATF4P18848 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ATF4P18848 CASC19-204ENST00000641001 2055 ntBASIC6.45□□□□□ -1.38
ATF4P18848 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.44□□□□□ -1.38
ATF4P18848 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.44□□□□□ -1.38
ATF4P18848 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ATF4P18848 AC092162.3-201ENST00000624511 1624 ntBASIC6.44□□□□□ -1.38
ATF4P18848 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ATF4P18848 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms