Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RETP07949 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
RETP07949 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.27□□□□□ -1.41
RETP07949 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 CASC19-228ENST00000641414 1684 ntBASIC6.26□□□□□ -1.41
RETP07949 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.26□□□□□ -1.41
RETP07949 AL078595.2-201ENST00000605309 1780 ntBASIC6.26□□□□□ -1.41
RETP07949 AC106872.5-201ENST00000508856 1416 ntBASIC6.26□□□□□ -1.41
RETP07949 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RETP07949 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 AC068769.1-201ENST00000474767 2426 ntBASIC6.26□□□□□ -1.41
RETP07949 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RETP07949 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 RNFT1P3-201ENST00000340898 1052 ntBASIC6.26□□□□□ -1.41
RETP07949 SNORD8-201ENST00000363915 110 ntBASIC6.26□□□□□ -1.41
RETP07949 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.26□□□□□ -1.41
RETP07949 RPS3AP2-201ENST00000407190 754 ntBASIC6.26□□□□□ -1.41
RETP07949 AL023284.3-201ENST00000407767 334 ntBASIC6.26□□□□□ -1.41
RETP07949 MIR1203-201ENST00000408812 85 ntBASIC6.26□□□□□ -1.41
RETP07949 AC017078.1-201ENST00000416146 368 ntBASIC6.26□□□□□ -1.41
RETP07949 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.26□□□□□ -1.41
RETP07949 AC007394.1-201ENST00000421941 531 ntBASIC6.26□□□□□ -1.41
RETP07949 BX119321.1-201ENST00000428912 797 ntBASIC6.26□□□□□ -1.41
RETP07949 AC005077.1-201ENST00000449226 375 ntBASIC6.26□□□□□ -1.41
RETP07949 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.26□□□□□ -1.41
RETP07949 RN7SL515P-201ENST00000463999 297 ntBASIC6.26□□□□□ -1.41
RETP07949 CR383656.1-201ENST00000484916 377 ntBASIC6.26□□□□□ -1.41
RETP07949 RN7SL714P-201ENST00000487050 298 ntBASIC6.26□□□□□ -1.41
RETP07949 AP005639.1-201ENST00000526939 192 ntBASIC6.26□□□□□ -1.41
RETP07949 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.26□□□□□ -1.41
RETP07949 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.26□□□□□ -1.41
RETP07949 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.26□□□□□ -1.41
RETP07949 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 AL157899.1-201ENST00000604110 936 ntBASIC6.26□□□□□ -1.41
RETP07949 RPL12P48-201ENST00000605620 304 ntBASIC6.26□□□□□ -1.41
RETP07949 MIR6793-201ENST00000612376 63 ntBASIC6.26□□□□□ -1.41
RETP07949 AP003789.1-201ENST00000617737 605 ntBASIC6.26□□□□□ -1.41
RETP07949 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.26□□□□□ -1.41
RETP07949 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.26□□□□□ -1.41
RETP07949 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
RETP07949 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 AC119674.1-213ENST00000641177 1386 ntBASIC6.26□□□□□ -1.41
RETP07949 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.26□□□□□ -1.41
RETP07949 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
RETP07949 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RETP07949 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.26□□□□□ -1.41
RETP07949 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RETP07949 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 AL442128.2-201ENST00000620246 1824 ntBASIC6.25□□□□□ -1.41
RETP07949 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.25□□□□□ -1.41
RETP07949 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.25□□□□□ -1.41
RETP07949 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RETP07949 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RETP07949 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 RNA5SP350-201ENST00000363298 111 ntBASIC6.25□□□□□ -1.41
RETP07949 RN7SKP160-201ENST00000363804 340 ntBASIC6.25□□□□□ -1.41
RETP07949 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RETP07949 AL355433.1-201ENST00000422804 300 ntBASIC6.25□□□□□ -1.41
RETP07949 CYCSP52-201ENST00000422857 310 ntBASIC6.25□□□□□ -1.41
RETP07949 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 GAPDHP75-201ENST00000433910 943 ntBASIC6.25□□□□□ -1.41
RETP07949 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.25□□□□□ -1.41
RETP07949 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.25□□□□□ -1.41
RETP07949 EIF3LP3-201ENST00000495197 822 ntBASIC6.25□□□□□ -1.41
RETP07949 AC022206.1-201ENST00000495947 347 ntBASIC6.25□□□□□ -1.41
RETP07949 AC108043.1-201ENST00000512696 574 ntBASIC6.25□□□□□ -1.41
RETP07949 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 CR383658.1-201ENST00000514609 734 ntBASIC6.25□□□□□ -1.41
RETP07949 RNA5SP434-201ENST00000516647 121 ntBASIC6.25□□□□□ -1.41
RETP07949 IGHV1-14-201ENST00000523391 241 ntBASIC6.25□□□□□ -1.41
RETP07949 AC084337.1-201ENST00000524809 686 ntBASIC6.25□□□□□ -1.41
RETP07949 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.25□□□□□ -1.41
RETP07949 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.25□□□□□ -1.41
RETP07949 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.25□□□□□ -1.41
RETP07949 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.25□□□□□ -1.41
RETP07949 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.25□□□□□ -1.41
RETP07949 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.25□□□□□ -1.41
RETP07949 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.25□□□□□ -1.41
RETP07949 AC005332.4-201ENST00000592752 579 ntBASIC6.25□□□□□ -1.41
RETP07949 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.25□□□□□ -1.41
RETP07949 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.25□□□□□ -1.41
RETP07949 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms