Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TNFP01375 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 OR7E101P-201ENST00000400428 513 ntBASIC5.84□□□□□ -1.47
TNFP01375 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 AL512422.1-201ENST00000407033 553 ntBASIC5.84□□□□□ -1.47
TNFP01375 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 MYL6P5-201ENST00000412707 459 ntBASIC5.84□□□□□ -1.47
TNFP01375 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 RPL36AP39-201ENST00000445859 318 ntBASIC5.84□□□□□ -1.47
TNFP01375 CT45A11P-201ENST00000448043 1134 ntBASIC5.84□□□□□ -1.47
TNFP01375 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 RN7SL174P-201ENST00000475578 289 ntBASIC5.84□□□□□ -1.47
TNFP01375 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 RN7SL101P-201ENST00000496350 279 ntBASIC5.84□□□□□ -1.47
TNFP01375 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.84□□□□□ -1.47
TNFP01375 AC106872.4-201ENST00000510050 523 ntBASIC5.84□□□□□ -1.47
TNFP01375 CYP4F27P-201ENST00000514557 494 ntBASIC5.84□□□□□ -1.47
TNFP01375 SNORA70.20-201ENST00000516848 126 ntBASIC5.84□□□□□ -1.47
TNFP01375 OR4A42P-201ENST00000531397 938 ntBASIC5.84□□□□□ -1.47
TNFP01375 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.84□□□□□ -1.47
TNFP01375 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 AC135626.1-201ENST00000556983 435 ntBASIC5.84□□□□□ -1.47
TNFP01375 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 AC007494.1-201ENST00000562293 760 ntBASIC5.84□□□□□ -1.47
TNFP01375 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 MIR4301-201ENST00000577203 66 ntBASIC5.84□□□□□ -1.47
TNFP01375 AP001496.3-201ENST00000580230 913 ntBASIC5.84□□□□□ -1.47
TNFP01375 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 AC027334.1-201ENST00000603257 310 ntBASIC5.84□□□□□ -1.47
TNFP01375 uc_338.26-201ENST00000612659 160 ntBASIC5.84□□□□□ -1.47
TNFP01375 AL137246.2-201ENST00000613439 662 ntBASIC5.84□□□□□ -1.47
TNFP01375 AL139099.4-201ENST00000614802 114 ntBASIC5.84□□□□□ -1.47
TNFP01375 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TNFP01375 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TNFP01375 AL662795.2-201ENST00000624252 3706 ntBASIC5.84□□□□□ -1.48
TNFP01375 AC062029.1-202ENST00000606164 3651 ntBASIC5.84□□□□□ -1.48
TNFP01375 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.84□□□□□ -1.48
TNFP01375 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
TNFP01375 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFP01375 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TNFP01375 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 THAP12P9-201ENST00000503971 2360 ntBASIC5.83□□□□□ -1.48
TNFP01375 MIR375-201ENST00000362103 64 ntBASIC5.83□□□□□ -1.48
TNFP01375 RN7SKP292-201ENST00000365522 317 ntBASIC5.83□□□□□ -1.48
TNFP01375 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.83□□□□□ -1.48
TNFP01375 AP003170.5-201ENST00000397185 335 ntBASIC5.83□□□□□ -1.48
TNFP01375 SDHDP6-201ENST00000414693 480 ntBASIC5.83□□□□□ -1.48
TNFP01375 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 AC099677.3-201ENST00000427081 395 ntBASIC5.83□□□□□ -1.48
TNFP01375 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 HMGN1P36-201ENST00000446623 298 ntBASIC5.83□□□□□ -1.48
TNFP01375 ACA64.4-201ENST00000459070 127 ntBASIC5.83□□□□□ -1.48
TNFP01375 RPSAP37-201ENST00000470913 821 ntBASIC5.83□□□□□ -1.48
TNFP01375 AC011411.1-201ENST00000509592 876 ntBASIC5.83□□□□□ -1.48
TNFP01375 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.83□□□□□ -1.48
TNFP01375 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.83□□□□□ -1.48
TNFP01375 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
TNFP01375 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.83□□□□□ -1.48
TNFP01375 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFP01375 AC145423.1-201ENST00000605712 336 ntBASIC5.83□□□□□ -1.48
TNFP01375 AP005431.1-201ENST00000618479 319 ntBASIC5.83□□□□□ -1.48
TNFP01375 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFP01375 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFP01375 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFP01375 AC008957.3-201ENST00000624112 2242 ntBASIC5.83□□□□□ -1.48
TNFP01375 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TNFP01375 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TNFP01375 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TNFP01375 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFP01375 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFP01375 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFP01375 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFP01375 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFP01375 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFP01375 AC116036.1-201ENST00000412199 367 ntBASIC5.82□□□□□ -1.48
TNFP01375 AL353626.3-201ENST00000413399 657 ntBASIC5.82□□□□□ -1.48
TNFP01375 HMGA1P8-201ENST00000414130 321 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms