Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
ALX3O95076 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 AC091544.5-201ENST00000620192 3815 ntBASIC6.92□□□□□ -1.3
ALX3O95076 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.92□□□□□ -1.3
ALX3O95076 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.92□□□□□ -1.3
ALX3O95076 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 AC096745.2-201ENST00000627783 1914 ntBASIC6.92□□□□□ -1.3
ALX3O95076 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 RNA5SP250-201ENST00000362534 119 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RN7SKP37-201ENST00000364494 296 ntBASIC6.92□□□□□ -1.3
ALX3O95076 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 TRAV35-201ENST00000390462 330 ntBASIC6.92□□□□□ -1.3
ALX3O95076 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ALX3O95076 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.92□□□□□ -1.3
ALX3O95076 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 AL590004.1-201ENST00000405321 300 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.92□□□□□ -1.3
ALX3O95076 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 USP9YP9-201ENST00000429406 715 ntBASIC6.92□□□□□ -1.3
ALX3O95076 OR5M13P-201ENST00000433944 937 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 FABP5P2-201ENST00000439042 408 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 COX6CP12-201ENST00000446748 202 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC005840.2-201ENST00000447193 355 ntBASIC6.92□□□□□ -1.3
ALX3O95076 DPPA3P1-201ENST00000448050 469 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AL354872.1-201ENST00000456361 967 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RN7SL621P-201ENST00000472565 299 ntBASIC6.92□□□□□ -1.3
ALX3O95076 MTND6P6-201ENST00000478031 263 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RN7SL608P-201ENST00000492377 279 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC113208.1-201ENST00000497944 318 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AL449212.1-201ENST00000499853 517 ntBASIC6.92□□□□□ -1.3
ALX3O95076 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.92□□□□□ -1.3
ALX3O95076 AC079395.1-201ENST00000510981 262 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.92□□□□□ -1.3
ALX3O95076 RNU6-358P-201ENST00000516564 75 ntBASIC6.92□□□□□ -1.3
ALX3O95076 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.92□□□□□ -1.3
ALX3O95076 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 AC018558.5-201ENST00000565840 952 ntBASIC6.92□□□□□ -1.3
ALX3O95076 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 MIR5708-201ENST00000579723 85 ntBASIC6.92□□□□□ -1.3
ALX3O95076 WDR45BP1-201ENST00000583470 1029 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC6.92□□□□□ -1.3
ALX3O95076 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 AC103881.1-201ENST00000603476 538 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC020765.1-201ENST00000604296 328 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC016405.2-201ENST00000607393 312 ntBASIC6.92□□□□□ -1.3
ALX3O95076 Y_RNA.812-201ENST00000610788 101 ntBASIC6.92□□□□□ -1.3
ALX3O95076 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC6.92□□□□□ -1.3
ALX3O95076 MIR6872-201ENST00000612981 62 ntBASIC6.92□□□□□ -1.3
ALX3O95076 Y_RNA.784-201ENST00000613803 101 ntBASIC6.92□□□□□ -1.3
ALX3O95076 ELMO2P1-202ENST00000614283 794 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC027139.2-201ENST00000615639 448 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 Y_RNA.787-201ENST00000616522 101 ntBASIC6.92□□□□□ -1.3
ALX3O95076 Y_RNA.780-201ENST00000617336 101 ntBASIC6.92□□□□□ -1.3
ALX3O95076 Y_RNA.801-201ENST00000619005 101 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AC009093.6-201ENST00000622268 553 ntBASIC6.92□□□□□ -1.3
ALX3O95076 AP003122.6-201ENST00000623831 495 ntBASIC6.92□□□□□ -1.3
ALX3O95076 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 LYG2-206ENST00000626374 650 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC6.92□□□□□ -1.3
ALX3O95076 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 AL513523.1-201ENST00000417868 1309 ntBASIC6.92□□□□□ -1.3
ALX3O95076 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.92□□□□□ -1.3
ALX3O95076 MAPK10-319ENST00000641459 2542 ntBASIC6.92□□□□□ -1.3
ALX3O95076 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALX3O95076 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms