Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AP001823.1-201ENST00000604056 1003 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.74□□□□□ -1.65
SSSCA1O60232 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 AP000550.3-201ENST00000637734 379 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 RBMY1HP-201ENST00000382759 1389 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC007938.2-201ENST00000604666 2634 ntBASIC4.74□□□□□ -1.65
SSSCA1O60232 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.74□□□□□ -1.65
SSSCA1O60232 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.74□□□□□ -1.65
SSSCA1O60232 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSSCA1O60232 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSSCA1O60232 RNA5SP485-201ENST00000365053 119 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSSCA1O60232 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSSCA1O60232 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.73□□□□□ -1.65
SSSCA1O60232 MTND2P12-201ENST00000417560 1252 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AL161742.1-201ENST00000418154 584 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 RNGTTP1-201ENST00000420965 728 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 OR10T1P-201ENST00000424327 947 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.73□□□□□ -1.65
SSSCA1O60232 PSMD10P2-201ENST00000432890 672 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 OR2L9P-201ENST00000444456 913 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AC097359.1-201ENST00000447946 463 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 MEMO1P4-201ENST00000453590 386 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AC004129.2-201ENST00000457229 287 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 RPL5P33-201ENST00000487833 905 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 RN7SL104P-201ENST00000498686 293 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 MINOS1P4-201ENST00000515470 318 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
SSSCA1O60232 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC130366.1-201ENST00000526505 1192 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.73□□□□□ -1.65
SSSCA1O60232 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 CHEK2P2-201ENST00000554701 672 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AC019322.1-201ENST00000571869 389 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.73□□□□□ -1.65
SSSCA1O60232 uc_338.33-201ENST00000614988 170 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 AC096861.1-201ENST00000616652 240 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 MFSD8-239ENST00000641590 2479 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSSCA1O60232 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
SSSCA1O60232 UGT2B24P-201ENST00000514441 1597 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.73□□□□□ -1.65
SSSCA1O60232 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 AL034546.1-201ENST00000623740 3693 ntBASIC4.73□□□□□ -1.65
SSSCA1O60232 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSSCA1O60232 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AC018717.1-201ENST00000457712 1505 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AP000473.2-201ENST00000602659 1537 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.72□□□□□ -1.65
SSSCA1O60232 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSSCA1O60232 RPL11P4-201ENST00000332269 436 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SSSCA1O60232 MIR301B-201ENST00000390813 78 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 AL132875.1-201ENST00000403623 949 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.72□□□□□ -1.65
SSSCA1O60232 RN7SKP117-201ENST00000410175 264 ntBASIC4.72□□□□□ -1.65
SSSCA1O60232 RN7SKP39-201ENST00000410773 322 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms