Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SLC28A1O00337 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.78□□□□□ -1.48
SLC28A1O00337 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC28A1O00337 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 AL590399.4-201ENST00000436561 601 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 AC010086.1-201ENST00000437359 1052 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AL590004.3-202ENST00000445883 451 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 ZNF619P1-201ENST00000446539 752 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 SNRPCP3-201ENST00000474888 476 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 SNX18P25-201ENST00000510539 758 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC036111.2-201ENST00000533247 901 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC012368.3-201ENST00000604190 219 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 AL713998.2-201ENST00000604538 1198 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 RPSAP75-201ENST00000605848 301 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 uc_338.26-201ENST00000612659 160 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC28A1O00337 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SLC28A1O00337 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SLC28A1O00337 AC018717.1-201ENST00000457712 1505 ntBASIC5.78□□□□□ -1.48
SLC28A1O00337 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC28A1O00337 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.48
SLC28A1O00337 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
SLC28A1O00337 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.77□□□□□ -1.48
SLC28A1O00337 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
SLC28A1O00337 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 AL133260.1-201ENST00000405720 405 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 NMD3P2-201ENST00000421815 761 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 VN1R20P-201ENST00000425215 966 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 TRGV7-201ENST00000427089 353 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SLC28A1O00337 ARMC4P1-201ENST00000438905 707 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 PA2G4P1-201ENST00000442248 1197 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 SEPT14P12-201ENST00000442280 560 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 AC002553.3-201ENST00000453002 341 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 RSU1P1-201ENST00000453416 441 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC28A1O00337 RPL12P30-201ENST00000488389 499 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC28A1O00337 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 RPS26P24-201ENST00000497656 331 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 AC113191.1-201ENST00000517759 403 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC28A1O00337 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.77□□□□□ -1.49
SLC28A1O00337 HMGN1P26-201ENST00000558737 303 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 AP005136.2-201ENST00000583253 1049 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
SLC28A1O00337 AL645933.2-201ENST00000606743 1207 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC28A1O00337 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC28A1O00337 AC015799.1-201ENST00000622996 3122 ntBASIC5.77□□□□□ -1.49
SLC28A1O00337 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC28A1O00337 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC28A1O00337 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms