Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX39AO00148 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.74□□□□□ -1.33
DDX39AO00148 AC007494.1-201ENST00000562293 760 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.74□□□□□ -1.33
DDX39AO00148 MIR132-201ENST00000591554 101 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 AL137246.2-201ENST00000613439 662 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX39AO00148 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX39AO00148 BRD7P6-201ENST00000431406 1860 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 AL669831.5-218ENST00000591702 1873 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.74□□□□□ -1.33
DDX39AO00148 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX39AO00148 PARP4P2-201ENST00000446672 3326 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
DDX39AO00148 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.74□□□□□ -1.33
DDX39AO00148 ZNF812P-201ENST00000457674 1694 ntBASIC6.74□□□□□ -1.33
DDX39AO00148 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 AC005261.2-201ENST00000593427 4258 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
DDX39AO00148 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 SELENOWP1-201ENST00000322792 252 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 AC023490.2-201ENST00000359859 470 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 AP003170.5-201ENST00000397185 335 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 MIR1203-201ENST00000408812 85 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 BMS1P10-201ENST00000443754 1120 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 PCNAP4-201ENST00000532690 730 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 AP005431.1-201ENST00000618479 319 ntBASIC6.73□□□□□ -1.33
DDX39AO00148 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.73□□□□□ -1.33
DDX39AO00148 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
DDX39AO00148 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.73□□□□□ -1.33
DDX39AO00148 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.73□□□□□ -1.33
DDX39AO00148 AC016583.1-201ENST00000624221 2431 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
DDX39AO00148 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
DDX39AO00148 AC107980.1-201ENST00000558671 3355 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 OR52B3P-201ENST00000314715 928 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 AL050305.1-201ENST00000399993 1230 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 AL096800.1-201ENST00000405326 893 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 RN7SKP151-201ENST00000410230 316 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.72□□□□□ -1.33
DDX39AO00148 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 VN1R110P-201ENST00000438988 971 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 AC016724.1-201ENST00000453215 421 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 GEMIN2P1-201ENST00000454246 752 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 ACA64.4-201ENST00000459070 127 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 AC023245.1-201ENST00000468501 517 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 CCDC11P1-201ENST00000503137 1162 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 SNORD46.2-201ENST00000516021 102 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.72□□□□□ -1.33
DDX39AO00148 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
DDX39AO00148 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 AC119403.2-201ENST00000590960 598 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
DDX39AO00148 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DDX39AO00148 AC027088.4-201ENST00000611559 1947 ntBASIC6.72□□□□□ -1.33
DDX39AO00148 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
DDX39AO00148 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
DDX39AO00148 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
DDX39AO00148 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
DDX39AO00148 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.71□□□□□ -1.33
DDX39AO00148 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
DDX39AO00148 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms