Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC125612.1-201ENST00000547580 377 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC233290.1-201ENST00000553021 1186 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 OTX2-203ENST00000554559 715 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC090826.1-203ENST00000569235 490 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL7AP69-201ENST00000595306 806 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL590032.1-201ENST00000604920 252 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC007671.1-201ENST00000616957 830 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL161420.1-201ENST00000619393 264 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SNX18P12-201ENST00000624821 759 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC099654.15-201ENST00000639802 509 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 JAML-213ENST00000640745 951 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC114947.2-201ENST00000565748 2125 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OR51C1P-202ENST00000641159 1444 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 CENPW-202ENST00000368326 443 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL21P67-201ENST00000402896 478 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL359694.1-201ENST00000403247 604 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MRPL53P1-201ENST00000414323 319 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL359092.1-201ENST00000417156 265 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 TRGV5P-201ENST00000419915 354 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 GAPDHP49-201ENST00000421421 961 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL357632.1-201ENST00000426688 643 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 KCTD9P1-201ENST00000430462 1167 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL021939.1-201ENST00000441868 886 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL354714.5-201ENST00000450131 590 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MEMO1P4-201ENST00000453590 386 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 DEFA10P-201ENST00000455014 288 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 OR7E62P-201ENST00000456741 477 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS18P13-201ENST00000461260 454 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL7AP28-201ENST00000464513 571 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL449P-201ENST00000464937 286 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC117392.1-201ENST00000487061 596 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL23AP40-201ENST00000487630 390 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL516P-201ENST00000496127 297 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 PLA2G12AP1-201ENST00000497678 568 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 NACAP6-201ENST00000509572 622 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AL390198.2-201ENST00000510553 222 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 AC138938.1-201ENST00000515431 782 ntBASIC3.14□□□□□ -1.91
CHKB-CPT1BH3BT56 IGHVII-15-1-201ENST00000517931 220 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms