Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GAPDHP19-201ENST00000431768 1005 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 SUMO2P8-201ENST00000434672 286 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 CUBNP2-201ENST00000443534 1139 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RNU7-157P-201ENST00000459600 66 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 TRBV5-2-201ENST00000489095 273 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC090958.1-201ENST00000511122 351 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC138517.1-201ENST00000515724 568 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RN7SKP288-201ENST00000516227 268 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 SNORA74.1-201ENST00000516320 180 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RNU6-943P-201ENST00000516960 98 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 OR10D4P-201ENST00000525892 951 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 DPPA3P2-201ENST00000553589 478 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RN7SL66P-201ENST00000582099 264 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AP005136.2-201ENST00000583253 1049 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC253576.2-201ENST00000618815 580 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC026367.3-201ENST00000619032 590 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC021766.1-201ENST00000624404 741 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 KYNUP3-201ENST00000574386 1341 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01613-201ENST00000561476 2780 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL050305.1-201ENST00000399993 1230 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 OR2W4P-201ENST00000406496 926 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 PSMD10P2-201ENST00000432890 672 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL392003.1-201ENST00000434394 243 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC00328-2P-201ENST00000436585 219 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 OR3D1P-201ENST00000438288 955 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 H3F3AP5-201ENST00000475267 429 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC00557-201ENST00000563184 1279 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 WBP1LP12-201ENST00000604449 331 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC011891.2-201ENST00000604949 397 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC105148.1-201ENST00000604961 409 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC022001.1-201ENST00000605193 268 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AL590410.1-201ENST00000617925 333 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 SNX18P12-201ENST00000624821 759 ntBASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms