Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC068768.2-201ENST00000602352 343 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AL513327.3-201ENST00000602618 469 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC005479.3-201ENST00000602790 431 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC073389.3-201ENST00000609434 935 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 MFSD8-219ENST00000641228 2559 ntBASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAV27A0A087WT01 AC012254.3-201ENST00000591183 2117 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC009135.2-201ENST00000624136 1768 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RN7SKP77-201ENST00000363261 353 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RNA5SP279-201ENST00000365513 117 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 METTL15P3-201ENST00000415522 1221 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AL139158.1-201ENST00000424719 340 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RPL5P10-201ENST00000445207 894 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RN7SL269P-201ENST00000467795 305 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC023245.1-201ENST00000468501 517 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RN7SL362P-201ENST00000494228 267 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AL158068.1-201ENST00000506116 616 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 BTG1P1-201ENST00000540396 508 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 AC093297.3-201ENST00000607056 2517 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RBPJP7-201ENST00000442803 1447 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 RBPJP5-201ENST00000449433 1447 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 MFSD8-239ENST00000641590 2479 ntBASIC5.3□□□□□ -1.56
TRAV27A0A087WT01 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL355834.1-201ENST00000556602 3965 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL121839.2-201ENST00000565058 6943 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 SELENOWP1-201ENST00000322792 252 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 RN7SKP78-201ENST00000364711 318 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL034417.1-201ENST00000399343 800 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 RPL35AP3-201ENST00000414680 288 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC007383.1-201ENST00000445875 636 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 HMGB1P7-201ENST00000450921 612 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 RNU1-88P-201ENST00000459274 128 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC136777.2-201ENST00000522979 358 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL121594.2-201ENST00000541658 472 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC005828.7-201ENST00000607331 556 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 uc_338.31-201ENST00000615595 186 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AC004801.6-201ENST00000616571 978 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL109924.4-201ENST00000623089 670 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 OR11H2-202ENST00000641517 1085 ntBASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAV27A0A087WT01 AL031123.3-201ENST00000623345 1837 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms