Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL355480.1-201ENST00000629041 99 ntBASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 MROH3P-201ENST00000435735 2676 ntBASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.38□□□□□ -1.23
CTDP1Q9Y5B0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 COX6B1P3-201ENST00000312310 260 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 OR7E25P-201ENST00000344844 931 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC112492.2-201ENST00000432774 1030 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 MRPS21P3-201ENST00000436696 262 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL606517.1-201ENST00000446914 387 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL353718.1-201ENST00000451028 517 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 RNU7-157P-201ENST00000459600 66 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC068228.1-201ENST00000461723 211 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 NDUFA5P5-201ENST00000468361 342 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC135999.1-201ENST00000478962 479 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 MORF4L2P1-201ENST00000503761 858 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC112184.1-201ENST00000505179 312 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 KHDC1P1-201ENST00000511053 508 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 IGHV4-55-201ENST00000520889 368 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 MRPS21P8-201ENST00000569196 235 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AP000484.1-201ENST00000620067 1252 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 CLCA3P-203ENST00000490028 2781 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 AC027575.3-201ENST00000583058 2747 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 CDY10P-201ENST00000452415 1567 ntBASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CTDP1Q9Y5B0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC004386.1-201ENST00000393214 761 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 MTND4LP7-201ENST00000431728 294 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 SOCS5P1-201ENST00000440415 949 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AL451063.1-201ENST00000450164 1133 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 RPS3AP53-201ENST00000454716 778 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 HMGN1P8-201ENST00000463578 288 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC094085.1-201ENST00000468914 584 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC098847.1-201ENST00000473094 348 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC093534.1-201ENST00000504977 132 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC098862.1-201ENST00000504991 413 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AP001960.1-201ENST00000506494 658 ntBASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CTDP1Q9Y5B0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms