Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC245096.1-201ENST00000413104 546 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC130360.1-201ENST00000425489 1117 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC108479.1-201ENST00000431142 427 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 GAPDHP59-201ENST00000435908 267 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC023141.3-201ENST00000436698 278 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 FTLP8-201ENST00000446770 267 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 PPIAP7-201ENST00000454070 489 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 OR7E99P-201ENST00000505750 922 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC130365.2-201ENST00000525882 1201 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AP000620.1-201ENST00000527147 504 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 MIR744-201ENST00000578242 98 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ARGFXP2-201ENST00000579304 949 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC073333.2-201ENST00000603589 769 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 AC004158.1-201ENST00000564508 4319 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 RBMY1HP-201ENST00000382759 1389 ntBASIC5.79□□□□□ -1.48
RNF11Q9Y3C5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AL591135.1-201ENST00000401578 5914 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC130304.1-201ENST00000622942 2385 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 RN7SKP184-201ENST00000362348 333 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 THEM7P-201ENST00000419556 672 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC007383.1-201ENST00000445875 636 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 SUMO2P10-201ENST00000452006 288 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC073476.1-201ENST00000452854 407 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC044810.1-201ENST00000480271 711 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC083795.1-201ENST00000491760 320 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 RN7SL362P-201ENST00000494228 267 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC113367.2-201ENST00000505749 160 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC112484.3-201ENST00000505910 329 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC108103.1-201ENST00000511286 446 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 MAST4-IT1-201ENST00000514241 658 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 OR7E158P-201ENST00000524483 910 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC011500.1-201ENST00000601963 469 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 AC140479.2-201ENST00000421567 3130 ntBASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF11Q9Y3C5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF11Q9Y3C5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RNF11Q9Y3C5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF11Q9Y3C5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms