Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC020915.5-201ENST00000596836 964 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC098483.2-201ENST00000603158 454 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC073046.2-201ENST00000604756 527 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 SNORA35B-201ENST00000607417 129 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC092681.3-201ENST00000609463 678 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AL096712.1-201ENST00000614561 159 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC005393.1-201ENST00000617916 584 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC140479.2-201ENST00000421567 3130 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC090220.1-201ENST00000593078 1699 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC007485.2-201ENST00000623493 1667 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 CASC19-228ENST00000641414 1684 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 TET1P1-201ENST00000426627 2301 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AL449283.1-201ENST00000602631 3403 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AC009779.8-201ENST00000641684 4384 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 AP000432.2-201ENST00000624164 2048 ntBASIC6.83□□□□□ -1.32
SSX2IPQ9Y2D8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC018628.1-201ENST00000624147 3819 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 OR11H13P-201ENST00000359695 979 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 SCAND3P1-201ENST00000439854 1060 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AP002371.1-201ENST00000463604 433 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SL369P-201ENST00000477138 299 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SL561P-201ENST00000488553 281 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 OR4R2P-201ENST00000530815 597 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL713998.2-201ENST00000604538 1198 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC108865.2-201ENST00000606881 432 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC129778.1-202ENST00000623812 261 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL591379.1-207ENST00000635982 261 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 OR7E91P-202ENST00000642062 1198 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC022905.1-201ENST00000503430 3048 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 SAGE3P-201ENST00000619800 1635 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AC093225.1-201ENST00000506867 1408 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 AL139384.2-201ENST00000613809 3590 ntBASIC6.82□□□□□ -1.32
SSX2IPQ9Y2D8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 LYARP1-201ENST00000436977 1501 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 RNA5SP350-201ENST00000363298 111 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms