Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.55□□□□□ -1.52
TRAPPC4Q9Y296 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL034546.1-201ENST00000623740 3693 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 SNORA5.1-201ENST00000384275 131 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RBBP4P5-201ENST00000398583 1266 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL354707.3-201ENST00000427308 331 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC108479.1-201ENST00000431142 427 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 HMGB1P7-201ENST00000450921 612 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RAB28P2-201ENST00000454299 641 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RN7SL254P-201ENST00000460609 284 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC005165.2-201ENST00000466070 380 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC091874.2-201ENST00000505889 720 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RNA5SP434-201ENST00000516647 121 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC092865.1-201ENST00000544395 1023 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC090286.3-201ENST00000573133 187 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AP005136.2-201ENST00000583253 1049 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AL359091.2-201ENST00000609303 556 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 CASC19-274ENST00000642018 970 ntBASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRAPPC4Q9Y296 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 YWHAZP6-201ENST00000399764 738 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 RN7SKP108-201ENST00000411367 328 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL035422.1-201ENST00000414193 397 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL139158.1-201ENST00000424719 340 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC130360.1-201ENST00000425489 1117 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC093166.3-201ENST00000448785 303 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC073594.1-201ENST00000462065 364 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 EIF4E2P2-201ENST00000492033 736 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC130365.2-201ENST00000525882 1201 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 OR8Q1P-201ENST00000526467 655 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC020916.2-201ENST00000591242 360 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AL022394.1-201ENST00000606979 292 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC141002.1-201ENST00000607025 279 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms