Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC109309.2-201ENST00000612597 332 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC103703.1-201ENST00000634783 663 ntBASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.97□□□□□ -1.13
NPC1L1Q9UHC9 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NPC1L1Q9UHC9 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
NPC1L1Q9UHC9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NPC1L1Q9UHC9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NPC1L1Q9UHC9 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 RN7SKP81-201ENST00000365603 331 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AL451142.1-201ENST00000375867 775 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AK4P4-201ENST00000419465 646 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 KRT8P51-201ENST00000438938 274 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 RN7SL174P-201ENST00000475578 289 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 RPS3AP15-201ENST00000483874 781 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 RN7SL57P-201ENST00000493687 290 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 snoU109.5-201ENST00000516231 132 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 ZNF322P1-201ENST00000568013 1209 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 AC100767.2-201ENST00000604840 693 ntBASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NPC1L1Q9UHC9 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 OR52B3P-201ENST00000314715 928 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AC093155.2-201ENST00000420734 937 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AC127526.2-201ENST00000426436 775 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 RPS3AP38-201ENST00000435889 763 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 GAPDHP48-201ENST00000436626 961 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AC006539.1-201ENST00000481419 501 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 MTATP6P1-201ENST00000514057 681 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 MIR2117-201ENST00000516780 80 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AP005431.1-201ENST00000618479 319 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 MTCO1P11-201ENST00000429111 1528 ntBASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.95□□□□□ -1.14
NPC1L1Q9UHC9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AL021877.2-201ENST00000624442 10684 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 GNG5P2-201ENST00000372054 207 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 SNORA17A-201ENST00000391185 133 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 RPS3AP2-201ENST00000407190 754 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 CDY17P-201ENST00000414121 1282 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 FRG2FP-204ENST00000453982 852 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AC006499.4-201ENST00000510947 694 ntBASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 SNORA17.5-201ENST00000630429 132 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms