Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RPS16P9-201ENST00000477220 427 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL591122.1-201ENST00000487348 492 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 RN7SL518P-201ENST00000491887 280 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC021146.8-201ENST00000507455 733 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC146944.3-201ENST00000509969 371 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 LTV1P1-201ENST00000510683 1237 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 RN7SKP233-201ENST00000517005 110 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 PCNPP1-201ENST00000552501 511 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC234778.2-201ENST00000566241 354 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 MIR5682-201ENST00000584864 76 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 MIR4719-201ENST00000585233 84 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC012254.4-201ENST00000588843 273 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 VN1R83P-201ENST00000595685 445 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 RMST_5.1-201ENST00000618704 126 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL161420.1-201ENST00000619393 264 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC109454.4-201ENST00000623411 649 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC068137.3-201ENST00000639191 341 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC073869.6-201ENST00000640656 341 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL358913.2-201ENST00000553881 1548 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 NEPNP-201ENST00000404786 1371 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC093909.5-201ENST00000621839 1799 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 NACA3P-201ENST00000359690 648 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 RNA5SP429-201ENST00000363688 109 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 RNU1-87P-201ENST00000363727 170 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 Y_RNA.517-201ENST00000384551 106 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CNTN3Q9P232 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 C1DP1-201ENST00000426049 402 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 PHB2P1-201ENST00000434943 890 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 Z74696.2-201ENST00000436514 498 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 ST13P21-201ENST00000453250 1098 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 CEACAMP11-201ENST00000455211 583 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 OR7E7P-201ENST00000455678 1012 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC122714.1-201ENST00000502510 459 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 DSTNP2-201ENST00000504533 515 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 Y_RNA.695-201ENST00000516715 107 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 RBMS2P1-201ENST00000525031 1226 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AL133241.1-201ENST00000556832 487 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 OR7E19P-202ENST00000589942 844 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 VN1R82P-201ENST00000601481 356 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AC079089.3-201ENST00000603094 673 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 AL135786.2-201ENST00000608422 615 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.7□□□□□ -1.18
CNTN3Q9P232 AL035661.1-201ENST00000620459 1144 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.7□□□□□ -1.18
CNTN3Q9P232 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms