Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 SNORA74.4-201ENST00000607595 199 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AL138693.1-201ENST00000622219 129 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC099654.15-201ENST00000639802 509 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AC132825.8-201ENST00000640783 297 ntBASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNB1IP1Q9NPC3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNB1IP1Q9NPC3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC079248.1-201ENST00000427568 1546 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC109446.4-201ENST00000623235 2755 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AL034546.1-201ENST00000623740 3693 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 SNORA5.1-201ENST00000384275 131 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 YWHAZP4-201ENST00000392459 708 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 SNORA77.2-201ENST00000408571 112 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC138761.5-201ENST00000433967 325 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 NPM1P18-201ENST00000434232 732 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC013410.1-201ENST00000436223 1232 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CUBNP2-201ENST00000443534 1139 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC234771.2-201ENST00000445718 597 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 MORF4-201ENST00000447135 971 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 RSU1P1-201ENST00000453416 441 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CEACAMP11-201ENST00000455211 583 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 RN7SL39P-201ENST00000462264 297 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 CYCSP25-201ENST00000525280 316 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AL133399.1-201ENST00000527476 298 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC135983.3-201ENST00000528049 1226 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AL163952.1-202ENST00000569625 600 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AL589863.1-201ENST00000595383 631 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 LSM1P2-201ENST00000604911 322 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC068726.1-201ENST00000610993 341 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC005899.6-201ENST00000620729 297 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 AL161756.3-201ENST00000641216 2071 ntBASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNB1IP1Q9NPC3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 CDY11P-201ENST00000447168 1651 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 SNORA64.3-201ENST00000365647 134 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 RPL11P3-201ENST00000395256 523 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AL034417.1-201ENST00000399343 800 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 RN7SKP166-201ENST00000410812 305 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AC245096.1-201ENST00000413104 546 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AC128677.1-201ENST00000436016 442 ntBASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.57□□□□□ -1.52
CCNB1IP1Q9NPC3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms