Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 OR1E3-201ENST00000575608 948 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 MTND2P13-201ENST00000577438 1039 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 NPIPB1P-202ENST00000588786 828 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AL589765.6-201ENST00000601909 549 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 MIR6721-201ENST00000617181 87 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AL122023.1-201ENST00000622847 530 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 RNF19BPY-201ENST00000458209 1550 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AL136984.1-201ENST00000607611 1893 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AP000432.2-201ENST00000624164 2048 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 AC027575.3-201ENST00000583058 2747 ntBASIC6.47□□□□□ -1.37
USP29Q9HBJ7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.47□□□□□ -1.37
USP29Q9HBJ7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.46□□□□□ -1.37
USP29Q9HBJ7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 MIR433-201ENST00000384837 93 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 YWHAZP4-201ENST00000392459 708 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC002127.1-201ENST00000421305 225 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC007064.3-201ENST00000422608 359 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 PSMD10P2-201ENST00000432890 672 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 RN7SL39P-201ENST00000462264 297 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 RN7SKP67-201ENST00000515905 235 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 IGHV4-55-201ENST00000520889 368 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC008055.1-201ENST00000547032 609 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC090286.3-201ENST00000573133 187 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC027229.1-201ENST00000583887 253 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 MIR4420-201ENST00000583944 77 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC011458.1-201ENST00000604034 617 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AC006924.1-201ENST00000610750 559 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AL512506.1-201ENST00000613918 449 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 AP001541.1-201ENST00000623322 1904 ntBASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
USP29Q9HBJ7 QRSL1P1-201ENST00000400977 1540 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 HDAC1P2-201ENST00000453661 1398 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RNU6-670P-201ENST00000364312 104 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RNA5SP433-201ENST00000364491 114 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AL445238.1-204ENST00000400311 463 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RPL21P50-201ENST00000417698 477 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms