Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC092754.2-201ENST00000463506 460 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 PGBD4P1-201ENST00000473644 407 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC091982.1-202ENST00000473923 343 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC011037.1-201ENST00000483964 558 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AF305872.1-201ENST00000485217 471 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 MTND5P13-201ENST00000513046 1079 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RNA5SP96-201ENST00000516041 107 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RN7SKP248-201ENST00000516278 305 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 NRON-201ENST00000517270 370 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RFPL1S-203ENST00000539579 330 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC018558.5-201ENST00000565840 952 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 DPRXP4-201ENST00000578053 568 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC087575.1-201ENST00000585087 229 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL512430.4-201ENST00000603085 613 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC064872.1-201ENST00000604823 1072 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC103591.3-201ENST00000608684 209 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC108673.3-201ENST00000609183 335 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL355073.2-201ENST00000612106 557 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC116165.3-201ENST00000614524 400 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC022079.2-201ENST00000619739 566 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 DDX43P1-201ENST00000510713 1763 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 DDX18P5-201ENST00000534547 1306 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 Y_RNA.194-201ENST00000363985 102 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 RN7SKP55-201ENST00000364888 307 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 ST13P16-201ENST00000401760 781 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL355379.1-201ENST00000405542 640 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL117344.1-201ENST00000407196 616 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 MEAF6P1-201ENST00000416092 327 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL161742.1-201ENST00000418154 584 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 GPN3P1-201ENST00000423883 535 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 GTF2IP3-201ENST00000433887 494 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 MTCO2P16-201ENST00000436962 677 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 HSFY3P-201ENST00000444242 1191 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 PTENP1-201ENST00000447117 1215 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 OR51P1P-201ENST00000447547 942 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 AC005410.1-202ENST00000460347 485 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 RPL34P34-201ENST00000465389 354 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 MTND2P14-201ENST00000482139 351 ntBASIC6.19□□□□□ -1.42
SEC61A2Q9H9S3 RPL21P47-201ENST00000483696 477 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms