Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 AL662795.2-201ENST00000624252 3706 ntBASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM54Q9BYV2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC105749.1-201ENST00000631338 2008 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL356317.1-201ENST00000396110 1436 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC110373.1-201ENST00000505994 3505 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC010894.1-201ENST00000313760 361 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RNU1-5P-201ENST00000362684 144 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RPL23AP18-201ENST00000416139 468 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC046176.1-201ENST00000435260 1170 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CCNJP2-201ENST00000457810 1163 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC236972.4-201ENST00000458091 963 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RPS3AP49-201ENST00000472161 790 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 NPM1P29-201ENST00000483112 803 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RN7SL655P-201ENST00000486087 298 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RPL5P33-201ENST00000487833 905 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RPL5P14-201ENST00000494197 878 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC009567.2-201ENST00000502989 349 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC010460.2-201ENST00000509054 677 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 SETP21-201ENST00000514799 892 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC022826.1-201ENST00000519383 805 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 OR5D2P-201ENST00000524390 911 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 OR4C49P-201ENST00000563891 900 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 OOSP1P2-201ENST00000579644 351 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC112503.2-201ENST00000609005 552 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AL050303.3-201ENST00000613704 284 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 OR4G3P-201ENST00000633500 913 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC090220.1-201ENST00000593078 1699 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AC073365.1-203ENST00000641055 1992 ntBASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM54Q9BYV2 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC011455.2-201ENST00000599320 3336 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 NAMPTP1-201ENST00000440465 2514 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC092634.1-201ENST00000366505 199 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 U3.52-201ENST00000384034 216 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AL391419.1-201ENST00000398901 1275 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 GSTA12P-201ENST00000402398 508 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 MTND4LP13-201ENST00000425022 298 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms