Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC018558.4-201ENST00000622153 281 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC117503.3-201ENST00000623811 601 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 AC005355.2-201ENST00000625064 484 ntBASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC28BQ9BUN5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC121334.1-201ENST00000396414 802 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AL645939.3-201ENST00000435408 225 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 GAPDHP37-201ENST00000442317 968 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 RN7SL350P-201ENST00000492591 299 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC105391.1-201ENST00000503155 1045 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC126615.2-201ENST00000553003 515 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AL133481.2-203ENST00000607558 139 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 AC004839.1-201ENST00000610269 501 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 MAPK10-328ENST00000641553 4009 ntBASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC28BQ9BUN5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RN7SKP185-201ENST00000362813 326 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RN7SKP145-201ENST00000363291 303 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RNA5SP346-201ENST00000363541 121 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RN7SKP279-201ENST00000411383 298 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL139135.1-201ENST00000412675 209 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC096632.2-201ENST00000438139 1239 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 POU5F1P5-201ENST00000445059 658 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 HIGD1AP16-201ENST00000450986 258 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 SDC4P-201ENST00000453285 601 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL079303.1-201ENST00000486611 463 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 RPSAP51-201ENST00000497462 645 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 OR8A2P-201ENST00000528631 952 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL121594.2-201ENST00000541658 472 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC100832.2-201ENST00000582080 776 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL353807.4-201ENST00000604995 257 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC022106.1-201ENST00000612834 766 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AC022400.9-201ENST00000623633 273 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 AL137058.3-201ENST00000624531 3099 ntBASIC5.83□□□□□ -1.48
CCDC28BQ9BUN5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms