Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 AC016745.2-201ENST00000608834 3443 ntBASIC5.45□□□□□ -1.54
RFT1Q96AA3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFT1Q96AA3 Z83820.1-201ENST00000456978 1499 ntBASIC5.45□□□□□ -1.54
RFT1Q96AA3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.45□□□□□ -1.54
RFT1Q96AA3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC239868.2-201ENST00000564237 4527 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AL354766.1-201ENST00000423396 542 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 IGLV3-4-201ENST00000432300 244 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC073410.1-201ENST00000435125 589 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 BMS1P11-201ENST00000442351 885 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 BMS1P9-201ENST00000457640 885 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 RN7SL372P-201ENST00000461982 298 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 RN7SL655P-201ENST00000486087 298 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 RN7SL350P-201ENST00000492591 299 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 OR52A4P-203ENST00000498233 1014 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC009567.2-201ENST00000502989 349 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC134698.1-201ENST00000511619 643 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC011416.1-201ENST00000514947 1732 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 OR4A42P-201ENST00000531397 938 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 OR4C49P-201ENST00000563891 900 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC005702.3-201ENST00000585345 1447 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 OR7E19P-202ENST00000589942 844 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 MIR132-201ENST00000591554 101 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 AC004805.3-201ENST00000603178 310 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 Z93930.3-201ENST00000607919 749 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 OR51C1P-201ENST00000608504 942 ntBASIC5.44□□□□□ -1.54
RFT1Q96AA3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFT1Q96AA3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.44□□□□□ -1.54
RFT1Q96AA3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 RNU6-1331P-201ENST00000363658 106 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 MRPS6P2-201ENST00000381143 370 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 MIR27A-201ENST00000385073 78 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC019178.1-201ENST00000392337 440 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 RN7SKP38-201ENST00000410782 309 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC006509.1-201ENST00000420788 634 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL731534.1-201ENST00000434711 269 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 RPL12P18-201ENST00000437175 325 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL020997.1-201ENST00000446554 349 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL356390.1-201ENST00000455684 397 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC112187.1-201ENST00000455837 479 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms