Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL022324.2-201ENST00000434827 780 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AL138787.1-202ENST00000437804 898 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 RPL22P17-201ENST00000438729 315 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AL451074.1-202ENST00000453762 989 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 RN7SL418P-201ENST00000473031 287 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC073522.1-201ENST00000483312 377 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC025271.1-201ENST00000485045 429 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 RPL7P38-201ENST00000488396 739 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 NDUFB4P2-201ENST00000509515 391 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 RPL7L1P7-201ENST00000509986 724 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC138517.1-201ENST00000515724 568 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 SNORA18.6-201ENST00000516792 115 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC091982.1-201ENST00000518134 520 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.27□□□□□ -1.09
HLA-CQ95604 OR6M2P-201ENST00000529831 871 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.27□□□□□ -1.09
HLA-CQ95604 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC012182.1-201ENST00000570133 895 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 SUGT1P3-202ENST00000604259 383 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC010200.2-201ENST00000605098 235 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 AC002094.4-201ENST00000613598 307 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.27□□□□□ -1.09
HLA-CQ95604 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
HLA-CQ95604 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AC093225.1-201ENST00000506867 1408 ntBASIC8.27□□□□□ -1.09
HLA-CQ95604 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-CQ95604 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
HLA-CQ95604 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-CQ95604 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 MTCO1P11-201ENST00000429111 1528 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC023886.2-201ENST00000321285 411 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL672167.2-201ENST00000377164 879 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 RNA5SP118-201ENST00000410385 109 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 RNU6-77P-201ENST00000410554 91 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AC092745.2-202ENST00000411880 369 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 SNRPEP10-201ENST00000420249 274 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AF274573.1-201ENST00000430535 494 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 CYCSP11-201ENST00000436426 315 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL451074.3-201ENST00000437709 472 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 ACTR3P2-201ENST00000439585 1257 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL353093.1-201ENST00000441292 436 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 LIN28AP2-201ENST00000445283 458 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 KF459542.1-201ENST00000450908 553 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AL139156.3-201ENST00000454802 394 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 RN7SL74P-201ENST00000464966 299 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 KCTD9P5-201ENST00000504141 1170 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC026412.2-201ENST00000512270 1075 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 RPL7L1P4-201ENST00000513004 707 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms