Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPS12P17-201ENST00000438591 377 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AL162739.1-201ENST00000450606 307 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 RAB28P2-201ENST00000454299 641 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 RNF19BPY-201ENST00000458209 1550 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 RPSAP39-201ENST00000467439 883 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC008410.1-201ENST00000483777 339 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC253576.1-201ENST00000511645 1156 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 PRMT5P1-201ENST00000514351 598 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 RN7SKP238-201ENST00000516483 249 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC060775.1-201ENST00000518241 520 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AC110056.1-201ENST00000525759 911 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AP003789.1-201ENST00000617737 605 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AL136228.1-201ENST00000622221 319 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC073429.2-201ENST00000569694 1444 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 SNORA21-201ENST00000362423 132 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 RN7SKP77-201ENST00000363261 353 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AL096829.1-201ENST00000413677 457 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 RPL7AP14-201ENST00000424041 802 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC027544.3-201ENST00000535082 757 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC079414.3-201ENST00000612986 1090 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC073365.1-203ENST00000641055 1992 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 AC114876.1-201ENST00000490962 1366 ntBASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM3Q8TF72 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC004129.2-201ENST00000457229 287 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC092332.1-201ENST00000563684 829 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 SNORD95-201ENST00000579879 68 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC024589.2-201ENST00000605642 1294 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 SDR42E1P1-201ENST00000611327 477 ntBASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SHROOM3Q8TF72 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms