Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 CR383656.5-201ENST00000547616 1340 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 RNA5SP514-201ENST00000363717 111 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL357752.1-201ENST00000412817 349 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC115223.1-201ENST00000466377 870 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC100832.1-201ENST00000471945 383 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 EIF1P7-201ENST00000487533 337 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 HIGD1AP14-201ENST00000507617 282 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC109481.1-201ENST00000509173 282 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 SUGT1P3-202ENST00000604259 383 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL512329.2-201ENST00000607350 548 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 uc_338.26-201ENST00000612659 160 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL139099.4-201ENST00000614802 114 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC005034.3-201ENST00000604845 1747 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC022819.1-201ENST00000563495 3910 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 OR2W4P-201ENST00000406496 926 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 Y_RNA.625-201ENST00000411256 107 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC096996.1-201ENST00000563813 325 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 AC008115.4-201ENST00000619780 775 ntBASIC7.17□□□□□ -1.26
SNED1Q8TER0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.17□□□□□ -1.26
SNED1Q8TER0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SNED1Q8TER0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AC008937.3-201ENST00000606813 1700 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AL161756.3-201ENST00000641216 2071 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 AL159987.1-201ENST00000347911 293 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SNED1Q8TER0 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 H2AFZP6-201ENST00000444403 394 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 OR7E116P-201ENST00000448529 957 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 RPS26P41-201ENST00000450370 284 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 AC112187.1-201ENST00000455837 479 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 RN7SL808P-201ENST00000496066 299 ntBASIC7.16□□□□□ -1.26
SNED1Q8TER0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.16□□□□□ -1.26
SNED1Q8TER0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms