Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CLHC1Q8NHS4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.77□□□□□ -1.48
CLHC1Q8NHS4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 U3.23-201ENST00000391132 200 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 RNA5SP156-201ENST00000410250 110 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AL096829.1-201ENST00000413677 457 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 RPS7P8-201ENST00000418311 581 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 VN1R20P-201ENST00000425215 966 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 ZNF619P1-201ENST00000446539 752 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 RPL23AP60-201ENST00000450011 454 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC099670.1-201ENST00000455141 783 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 H3F3AP5-201ENST00000475267 429 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 SNX18P25-201ENST00000510539 758 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 RN7SKP288-201ENST00000516227 268 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC021733.2-201ENST00000518830 497 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 LINC00556-201ENST00000569603 412 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 MIR3157-201ENST00000578688 85 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AP005136.2-201ENST00000583253 1049 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AP001823.1-201ENST00000604056 1003 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC007603.3-201ENST00000636915 979 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC022325.1-201ENST00000502748 2199 ntBASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.77□□□□□ -1.49
CLHC1Q8NHS4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC140134.1-201ENST00000511830 3544 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 SNORD1C-201ENST00000363315 78 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 CBX1P3-201ENST00000413296 527 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RANP7-201ENST00000418085 644 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RPS15AP30-201ENST00000420976 390 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 FTLP19-201ENST00000433300 394 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RPL12P49-201ENST00000441100 121 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RPS18P1-201ENST00000447840 458 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 snoU13.29-201ENST00000459370 104 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 SNRPCP3-201ENST00000474888 476 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 RPL23AP40-201ENST00000487630 390 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 TRBV5-2-201ENST00000489095 273 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 HMGN1P16-201ENST00000508308 283 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC090958.1-201ENST00000511122 351 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 ZNF519P4-201ENST00000514008 125 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 AC011891.2-201ENST00000604949 397 ntBASIC5.76□□□□□ -1.49
CLHC1Q8NHS4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms