Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC026254.2-201ENST00000475295 371 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 SIAH1P1-201ENST00000479411 923 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 OR2A3P-201ENST00000493774 953 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC006499.3-201ENST00000506077 748 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 RN7SKP5-201ENST00000517045 272 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 CYCSP22-201ENST00000517555 339 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 IGHV4-55-201ENST00000520889 368 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 OR10G5P-201ENST00000532733 358 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 RN7SL475P-201ENST00000583379 298 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 VN1R81P-201ENST00000602085 372 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC018645.2-201ENST00000609151 472 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC034111.1-201ENST00000562143 3770 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC007993.1-201ENST00000621298 2430 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AL590763.1-201ENST00000398297 1545 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC007998.4-201ENST00000612496 2533 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 RACGAP1P-201ENST00000550663 1879 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC235565.1-201ENST00000456962 1325 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC022819.1-201ENST00000563495 3910 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 RNU1-134P-201ENST00000362935 165 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 RNA5SP346-201ENST00000363541 121 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AL590762.1-201ENST00000391782 432 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 BX284632.2-201ENST00000421091 399 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 RN7SL329P-201ENST00000467740 299 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC027338.1-201ENST00000514840 825 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AP000648.1-201ENST00000529682 397 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AL157899.1-201ENST00000604110 936 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 BNIP3P31-201ENST00000604515 566 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AL031601.1-201ENST00000605702 394 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC034229.4-201ENST00000607861 441 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC026951.2-201ENST00000613847 241 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 AC022960.3-201ENST00000619794 441 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 CASC19-243ENST00000641588 1546 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 SPATA31C2-201ENST00000324915 3777 ntBASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.62□□□□□ -1.19
SMC1BQ8NDV3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms