Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC026523.2-201ENST00000625039 7739 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AL139805.1-201ENST00000407837 289 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 U3.43-201ENST00000410734 213 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC244453.4-201ENST00000419150 388 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 CYP4F30P-202ENST00000420048 405 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC007568.1-201ENST00000422912 471 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 VN1R20P-201ENST00000425215 966 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 CLNS1AP1-201ENST00000435954 682 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 H3F3AP5-201ENST00000475267 429 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 RN7SL165P-201ENST00000477476 291 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 OR9A1P-202ENST00000484361 945 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 MTND3P6-201ENST00000485242 339 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC114728.1-201ENST00000488289 483 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC098799.1-201ENST00000504752 800 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC009729.1-201ENST00000548873 1133 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AL121579.2-201ENST00000555466 590 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 RN7SL475P-201ENST00000583379 298 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AL008723.3-201ENST00000608926 449 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 OR7E91P-202ENST00000642062 1198 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 OLMALINC-203ENST00000641087 3779 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 AC003985.2-201ENST00000562268 1669 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.84□□□□□ -1.47
NUP54Q7Z3B4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
NUP54Q7Z3B4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NUP54Q7Z3B4 TMCC1P1-201ENST00000518897 1980 ntBASIC5.84□□□□□ -1.48
NUP54Q7Z3B4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.48
NUP54Q7Z3B4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AL136984.1-201ENST00000607611 1893 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RPL11P4-201ENST00000332269 436 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RNA5SP279-201ENST00000365513 117 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RNU6-1263P-201ENST00000384601 106 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RAB5CP1-201ENST00000395972 580 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RNA5SP251-201ENST00000410614 137 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC099782.1-201ENST00000425889 474 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RPSAP32-201ENST00000432681 526 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 VPS25P1-201ENST00000455691 508 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RN7SL552P-201ENST00000462094 276 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RN7SL369P-201ENST00000477138 299 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RN7SL326P-201ENST00000477493 296 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC009120.3-201ENST00000563335 499 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC005632.2-201ENST00000564271 828 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC138473.1-201ENST00000605717 526 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AL137246.2-201ENST00000613439 662 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 AC092692.1-201ENST00000623625 2595 ntBASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP54Q7Z3B4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NUP54Q7Z3B4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms