Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHFQ7M4L6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC024651.2-201ENST00000562480 2098 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 RNU6-1331P-201ENST00000363658 106 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL353625.1-202ENST00000366273 571 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 CCNB2P1-201ENST00000399411 1150 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 RN7SKP129-201ENST00000410288 299 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 UBE2V1P6-201ENST00000430840 422 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AK3P5-201ENST00000432033 519 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC092106.2-201ENST00000436597 487 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 BMS1P11-201ENST00000442351 885 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 BMS1P9-201ENST00000457640 885 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 RPS3AP49-201ENST00000472161 790 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC090058.1-201ENST00000498788 435 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC073648.3-201ENST00000504939 925 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC093870.1-201ENST00000506837 213 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AL589863.1-201ENST00000595383 631 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 BNIP3P35-201ENST00000604530 490 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 MIR7159-201ENST00000620587 66 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 AC097372.4-201ENST00000625025 466 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 GTF2IP4-201ENST00000453092 2054 ntBASIC5.6□□□□□ -1.51
SHFQ7M4L6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHFQ7M4L6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHFQ7M4L6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC010894.1-201ENST00000313760 361 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AMZ2P2-201ENST00000406819 1057 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 GTF3AP1-201ENST00000416942 1004 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 MTND1P10-201ENST00000426108 832 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 GTF3AP6-201ENST00000432585 986 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC083855.1-201ENST00000440041 258 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 COL11A2P1-205ENST00000441798 676 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AL354872.1-201ENST00000456361 967 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 AC108751.3-201ENST00000461814 1020 ntBASIC5.59□□□□□ -1.51
SHFQ7M4L6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.59□□□□□ -1.51
SHFQ7M4L6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms