Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 EIF3FP1-201ENST00000613970 806 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 SMG1P5-202ENST00000529428 4219 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 SMG1P2-201ENST00000566127 4221 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC005294.1-201ENST00000355509 281 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 NRBF2P2-201ENST00000413087 861 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 DUTP1-201ENST00000493631 470 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 PRELID3BP5-201ENST00000508612 460 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 MIR4311-201ENST00000580794 100 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC007614.5-201ENST00000623424 8892 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PABPC1P8-201ENST00000452851 2086 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 SNORA70.2-201ENST00000364506 135 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 RNA5SP211-201ENST00000365516 117 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 GLULP6-201ENST00000399502 913 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 IGKV1OR22-5-201ENST00000458718 354 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC093824.1-201ENST00000508796 343 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 AP004607.3-201ENST00000530354 3915 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 AL022323.3-201ENST00000623888 5388 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 RPL10P10-201ENST00000403509 664 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 RN7SKP288-201ENST00000516227 268 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 MIR2117-201ENST00000516780 80 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC068790.7-201ENST00000602347 528 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC020910.2-201ENST00000603635 610 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC127381.1-201ENST00000555979 939 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 RBM22P12-201ENST00000567098 1255 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 SAMMSON-209ENST00000641222 1100 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13CQ709C8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 ZNF101P1-201ENST00000435701 1720 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13CQ709C8 MAPK10-338ENST00000641647 3362 ntBASIC4.62□□□□□ -1.67
VPS13CQ709C8 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms